Salvia splendens (scarlet sage): 121783625
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Entry
121783625 CDS
T07627
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121783625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121783625
03036 Chromosome and associated proteins [BR:
sspl03036
]
121783625
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121783625
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121783625
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
121783625
Noncanonical PRC1 (PRC1.1)
121783625
Noncanonical PRC1 (PRC1.3/1.5)
121783625
Noncanonical PRC1 (PRC1.6)
121783625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_4
RAWUL
zf-RING_6
zf-rbx1
zf-UDP
zf-Nse
zf-C3HC4_5
zf-RING_11
ZNF512_C2HC
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
121783625
NCBI-ProteinID:
XP_042037689
LinkDB
All DBs
Position
21:complement(8539889..8544331)
Genome browser
AA seq
442 aa
AA seq
DB search
MPAQKRPRDSSTPPPSPPDAEKGDDSPRGSENHSPEQPQDVSDSDCSSDSSGGEKDEFIV
VKLAEVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS
LRDDPNYDALIAALYPDIDKYEEEQELAFHEEERARNKQIQASIAQTFRRQAEALGKKRT
TRATSATFVRRQGNHRNLRGRRNRAAERNGSDEEEGINGHDESKDSSSTDEHSEPKTKRY
KRWGGARRSQPSPGGSGDDADYSEATRGILGASSTPHGSTELIAWGRGRNRSNNRHGGLN
WTNGRVTRGHRLSKLTNRLKSLHESDEMLKISVMIVSLHEETIPNLKRPYLCCSPTSSVR
HLCQYVAMQTSMEASEIEMLIIKDFHPVNNSLILPKESGALDPNQNELHLLDEQQTLEEI
NARFTQHHLVFAYRPKAKPEGK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgcagaagcggccgcgcgacagcagcactcctccgccgtcgccgcccgatgca
gagaaaggcgacgattcgccgcgaggcagcgagaatcacagccctgaacagcctcaagac
gtctcagattccgactgcagctccgactccagcggcggagagaaagacgaatttattgta
gtgaaactggcggaagtgcgaaaggaagtccagtgtccaatatgtttaggcatcattagg
aagacaagaacagtcatggaatgcttgcatcgcttttgcagagagtgcattgacaaatcc
atgcgacttggcaacaacgaatgtcctgcttgccgcactcattgtgctagtcggcgttct
ctaagagatgatccaaattatgatgccctgatcgctgctctctatccagacatcgataag
tacgaggaagagcaggaactggctttccatgaagaggagagagctcgcaataagcagatc
caagcttctattgcccagactttccgtcgtcaagctgaagctctaggaaagaaacgaaca
acaagagctacatccgcaacatttgtcaggaggcagggcaatcatcgaaatttgcgaggt
cggagaaaccgtgctgctgaacgcaacggatctgatgaagaggaaggtattaatggacat
gatgagagtaaagactcatcctcaactgacgagcactctgaacccaaaacaaaaagatac
aagagatggggaggagctcgtagatcacagccatcaccggggggtagtggagatgatgct
gattattcagaagcaaccagggggatacttggtgcatcttctacacctcatggcagtaca
gaacttattgcctggggaagaggccgcaatcgcagtaataaccgacatggtggcctgaat
tggacaaatggtagggttactaggggtcaccggttgtcaaagctgactaatcgtctcaaa
tctttacatgaaagcgatgaaatgttgaaaattagtgtcatgattgtctcattgcacgaa
gagacgatacccaacttgaagcgaccgtacctctgctgcagccccacatcgtcagtgaga
cacttatgccagtatgttgctatgcagacatccatggaagccagtgagattgagatgcta
ataataaaagacttccatcctgtgaacaactcgctaattctcccgaaagaatctggtgcc
ttagatcctaaccagaacgagctgcatttgttggatgagcagcaaactttggaggaaatt
aatgccaggtttactcagcaccatctggtttttgcataccggccaaaggcgaaacccgaa
gggaagtga
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