Salvia splendens (scarlet sage): 121783893
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Entry
121783893 CDS
T07627
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121783893
Transcription machinery [BR:
sspl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
121783893
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Mg_chelatase_C
Motif
Other DBs
NCBI-GeneID:
121783893
NCBI-ProteinID:
XP_042038010
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Position
21:22758259..22761867
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AA seq
512 aa
AA seq
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MGVVTVSSSSGRIPLGVKARNLTRASSLKRLVVLSFKSNESKPVSLVAKRESLALPLETN
KDTRKISRKAKKRPERVKAVASPSILELDYGEAGAILEKLYKRSPGTDVSDEEIKIGRGK
RRRPLRKKSVETEEAEKERDVSVVRSQKKGKRLNLEKRISMRMKKEDEFVALAQNKKHRK
NDEDEKIDRLVREYTSSTDLVSLDWKKMKIPPVLLSSEHAWLFKLMQPMKEILKVKETLK
SDLGRDLTDDEVAKKINMDVFQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFANGP
RFQDLCQAGVKGLMTGIDRFEPRRKFRLSTYGLFWIRHAIVRSLTLSSFTKVSFGLDSVR
VEIQRAKQDLHFELQRIPTVEEITKRVGISPERYHEVMRASKPIASLHARHEVTNEEFIN
AITDVDGVEGDSRRQPALLRLALDDVLDSLKPKESLVMRQRYGLDGKRDRTLGEIAGNLN
ISREMVRKHEVKALMKLKHPARVDYLRRYIYK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgtgactgtttctagttcttcaggacgaattccattgggagtgaaagccaga
aatttgactcgtgcatcctcattgaagaggctagtagtgttgtctttcaaatccaatgaa
agtaaacctgtatccttggttgctaaacgagaatctctagctttacccttggagacgaat
aaagatactaggaagatatcaaggaaggcgaagaagcggcctgaacgagtaaaagcagtc
gcctctccaagtatattggagttggattacggcgaagcaggtgcgatacttgaaaaatta
tacaagcgaagtcctggtacagatgtatccgatgaggagatcaaaataggaagggggaag
agacggcggcctcttaggaagaagagtgtggaaactgaggaggcagagaaggaaagggat
gtgagtgtggtgaggagccagaaaaaggggaaaagattgaatctcgagaagagaatttct
atgagaatgaagaaagaagatgaatttgttgcattagcccaaaataagaaacacagaaag
aatgatgaagatgagaagattgataggcttgttagggagtatacttcttcgacagatttg
gtcagcttagattggaagaaaatgaagattccgcctgttcttctttcatctgagcatgcc
tggcttttcaaattgatgcaacctatgaaggaaatcctcaaagttaaggaaaccttaaaa
agtgatttaggaagagatctaactgatgatgaagtagcaaagaagataaatatggatgta
tttcagctgcggaaacagttagaagttggtcgagctgccagaaataagttgatcaagcac
aacctgcggcttgttctatttgtcatgaataagtattttcaagactttgctaatggccca
agattccaagatctctgtcaagctggggtgaagggtcttatgactggtattgatcgcttt
gaaccaagaaggaagttccgactctcaacatatggcctcttctggatcaggcatgccatt
gttcgctcattgacactgtcaagcttcacaaaggtctcctttggccttgactcggtcaga
gtagaaatccagagggccaagcaggatctgcattttgagcttcagaggataccaactgtt
gaagagattacaaaacgtgttggaatctcccctgaaagataccatgaagtgatgagggca
tcgaagcctattgcttctctccatgcacgtcatgaagtaaccaatgaggagttcatcaat
gccattactgatgttgatggtgttgaaggagatagtaggagacaaccagcacttctcaga
cttgctcttgatgatgtgcttgattctctgaagcccaaggagagtttggtgatgaggcag
agatacgggctcgatgggaaaagagatagaacacttggagaaattgctgggaatttgaac
atttcaagagagatggttcggaagcatgaagtgaaggctctgatgaagctcaagcatcca
gctcgagtcgattacctccgccgctacatttacaaatga
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