Salvia splendens (scarlet sage): 121784772
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Entry
121784772 CDS
T07627
Name
(RefSeq) LOW QUALITY PROTEIN: spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121784772
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sspl04812
]
121784772
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
121784772
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121784772
Cytoskeleton proteins [BR:
sspl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
121784772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_5
AAA_25
AAA_16
AAA_14
TIP49
AAA_2
DUF815
NPHP3_N
Vps4_C
Mg_chelatase
AAA_24
IstB_IS21
RNA_helicase
AAA_7
nSTAND3
AAA_28
AAA_33
MCM
AAA_30
AAA_17
bpMoxR
ABC_tran
PhoH
DUF4368
MIT
Motif
Other DBs
NCBI-GeneID:
121784772
NCBI-ProteinID:
XP_042038941
LinkDB
All DBs
Position
2:complement(4617661..4622305)
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AA seq
486 aa
AA seq
DB search
MSFLKDIIDNFSSIFSDSAQTGKNPSTGAMDGDGGVSTGNERTAYKLKGYFDLAKVEIDK
AVRAEEWGLPDDAVFCYQNAQSILAEAVSTPVPSYITSSEMEKVQSHRQKISKWQGQVAE
RLQTLTRRTGGSSEIKSMSPKLQTGVVSSSVSRPRKVAAQKVSVNNRAGPSLRSQGNNAP
TLQKPAQGSVGGHDAKLVEMINSVIVDRSPSVKWDDIAGLEMAKQALTEMVILPTKRRDL
FTGLRKPAKGLLLFGPPGTGKTLLAKAVASESEATFFNVSASSLTSKWVGEGEKLVRTLF
QVAISRQPSVIFIDEIDSIMSTRTENENEASRRLKSEFLVQFDGVASNSGDLVTVIGATN
KPQELDDAVLRRLVKRIYIPLPDANARRVLLKHKLKGRAFSLPDRDVERLVAETDGYSGS
DLQALCEEAAMMPIRELGADILTVQANQVRKLRYGDFQKAMTVIKPSLQRSKWAELERWN
REFGSN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctgaaagatatcatcgacaattttagttcgatcttctccgattcggcacag
actgggaaaaaccctagcaccggagcgatggacggggatggcggtgtttcgacggggaat
gagcggactgcgtataagctgaaaggttactttgatttggccaaagtggagattgataag
gctgttcgcgccgaggaatggggtttaccagacgacgccgttttttgttaccagaatgcg
cagagtatactggctgaagcggtttccactccagtgccttcgtacatcacctctagtgaa
atggagaaggtgcaatctcatcggcagaagatatcaaaatggcagggccaagtagcagag
agactacaaactttaactcgaagaacaggtggatcatcagaaatcaagagtatgtcacca
aagttacaaaccggggtagtttcatcttcggtttcacgaccaagaaaagtggcagcacaa
aaagtttctgtcaataacagagctggtccttctctgaggagtcaaggaaataatgcccca
actttgcaaaaacctgctcaaggatctgtaggtggtcatgatgctaaactggtagagatg
ataaactctgtgattgttgatcgtagcccttcagttaaatgggatgacattgctggtctt
gagatggcaaaacaagcattgacagaaatggttattctaccaacaaaaagaagagacctt
tttactggtcttcgaaaaccagccaaaggtttactgctctttggaccacctggtactgga
aaaaccctgcttgctaaagcagttgcttcagaatccgaagctacattttttaatgtttct
gcttcttcactaacatcaaagtgggtgggagagggtgaaaagctcgttcgtactcttttc
caggttgccatttccaggcagccatcagttatcttcattgatgagatagatagtataatg
tcaacaagaacggaaaatgagaatgaagcaagtagaaggttgaagtctgagtttctagtt
cagtttgatggggttgcgtcaaattctggtgatttagttactgtcattggtgcaaccaat
aaaccccaagaattggatgacgcagttcttagaagactggtaaagagaatctacatacct
ttgccggatgcaaatgctaggagagttcttctgaagcataagctcaagggtcgagcattt
tctttgccagatagagatgtagagagacttgtggctgaaactgatgggtattccggaagc
gacctacaagctttgtgtgaggaagctgcaatgatgccaatcagagagctaggtgcagac
atccttacagtccaggcaaatcaggttaggaaattgagatatggagattttcagaaggca
atgactgttatcaagcctagcttacagagaagcaagtgggctgaactcgaaaggtggaat
cgagagttcggttccaactag
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