Salvia splendens (scarlet sage): 121784956
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Entry
121784956 CDS
T07627
Name
(RefSeq) protein SEH1-like
KO
K14299
nucleoporin SEH1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121784956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121784956
04131 Membrane trafficking [BR:
sspl04131
]
121784956
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121784956
Membrane trafficking [BR:
sspl04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
121784956
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR5
ANAPC4_WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_WDR75_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
WDCP
DSE1_N
Motif
Other DBs
NCBI-GeneID:
121784956
NCBI-ProteinID:
XP_042039175
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All DBs
Position
21:complement(26983140..26986256)
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AA seq
325 aa
AA seq
DB search
MDKSILVLDKGTRCTAWNYSGERLVAGLIDGSLAIYDSTDPASSNFTCTHRFKAHNGSIV
KVVWAPPEYGDAVACISEDGNLSLWEEVVDDAEGPHWKMCKCFDMNTSQVLDVQFGYGQT
SLKLVAAYSDGQVKIHELLDTLELEKWQLQAEFQNVIDLVSKFGNVSCLSASISWNPERI
EVRQSSFVLGFNSTTPSLNSAKVWEFDLDHQRWLPVAELSLPEDKGDQVSSVAWAPNIGR
PYELIAVATQKGISIWQLGSNPDHDGRLSVHRVALLSGHENEVWEMEWDMSGMTLATTGS
DGVVRLWQSNLNGAWHEQAVLAPPS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggataagtccattctggtacttgacaaaggtacaagatgcacagcttggaattacagc
ggcgagagattggttgccggactcattgatggttcgttggcaatttatgattcaactgat
ccagcatcttcaaactttacttgtacccacagatttaaggcacataatggcagcattgtg
aaagtggtctgggctccgccagaatacggtgatgcagttgcttgcattagtgaagatggg
aatttgtccttgtgggaggaggtcgtggatgatgctgaagggcctcactggaagatgtgc
aaatgctttgatatgaacacaagtcaagtactagatgttcaatttggatatggtcaaaca
agtctgaaattggttgctgcatattctgacggacaagttaaaatacatgagctcctagat
acgcttgaactggagaagtggcagcttcaggctgagtttcaaaatgtgattgatttggtc
tccaagtttgggaatgtctcctgtttatctgcgtccatttcatggaatccagaacgaatt
gaagtccgacaatcaagttttgttttaggctttaattcaaccactccatcattaaattct
gcaaaggtctgggagtttgatctggatcatcaaagatggcttccagttgcagagctttct
ttacccgaggacaagggtgatcaggtttcttcagttgcctgggccccaaatatcggaagg
ccttatgaactgatagctgttgcgactcagaaaggaatatcgatctggcaacttgggtca
aaccctgatcatgatgggagactttcagtgcatagggttgcattgctctctggccatgag
aatgaggtgtgggagatggaatgggatatgagtggaatgacacttgctacaacgggaagt
gatggcgttgtgaggctgtggcagtccaacttaaatggagcatggcacgagcaagctgtt
ctggcaccacctagttag
DBGET
integrated database retrieval system