Salvia splendens (scarlet sage): 121785678
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Entry
121785678 CDS
T07627
Name
(RefSeq) nuclear-pore anchor-like
KO
K09291
nucleoprotein TPR
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121785678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121785678
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121785678
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR
Nucleoprot-TPR
TPR_MLP1_2
Fez1
Motif
Other DBs
NCBI-GeneID:
121785678
NCBI-ProteinID:
XP_042040016
LinkDB
All DBs
Position
22:16859976..16878996
Genome browser
AA seq
2054 aa
AA seq
DB search
MPLFVSDEEFRRCSHDAAILTEKADDFIRGLFNQIETVKAEADAASITLEQTCALNEQKY
VSLSAEYSSLLLHNSEINALLEKRDAEIAELKVEKQRFLLQSIEKDGEVERLMREASELH
RSKRQLLELVEQRDLEINEKNATIKSYLDKIVDLTENAASKDAQIRDLESESGRLHATTD
RILQEKELLERHNSWLNEELTTKVNNLIQVRKEYGEREADVSGKLADVEQKLKDSANSLK
FHKDRARELEEKLASVERELLSTKDAAACAEQRSLAEISTVTKLVDLYKESSEEWSKKAG
ELEGVIKALETHLNQVEAEYKDKLDKEVSARKEVEKESTDLKYQLESCQTELEKLKRRNE
LQHLPLSSFTTGLLTNSVDDDEMVLDDRAIIPSIPAGVSGTALAASLLRDGWSLGKIYAK
YQEAVDALQHEQLGRKQSQAILERVLYEIEEKAGVIMDEREEHETLVEAYSALDQKLQQT
LSGHSTLEITIQELKAKLKRQERDFAVAQKEIVELQQQVAVLLKECRDVQLRCGSVTRYQ
DDELISGFSVPAGSESRAENIILDHLLTFKDINGLVEQNVQLRSLVRNLSDQIEDNGAEL
KEKYEKELQMHMEETASKVNAVLLRAEEQESMIESLHTSVAMYKKLYEEEQKLHAYPTHL
PETVPERGSREIIPIQESIHETSRKHEHTLERLRSLEEDLAKSKNDIISLRSDRDKLQMV
ATFAEEKLARFLKEFEQQREEHNGIRARNVEFSQIIVDYQRKLCESAESLDAANELSRKL
TMEVSILNQEKEMLHNSEKRASDEVCSLSERVHRLQATLDTMRSAEEVREEARGVERRKQ
EDYVNKIEREWAEAKRELQEQRDLVRNLSLEHDSDLKDARKQVDELNKELANALRSVANA
ESRAAIAEARYSDLEKIVESTRTKDSDGVDSGLSSSSTEKMLAKFRDEIQKLREEAEASK
NHMLQYKSVAQVNEEALKQLEVAHENFRKEADEFKRSLENEVHLLREHVTELDSECKLKT
EEAISANSGKEEALAGALFEIASVKDDYSVKMSQIVVMESQISALKEELESEHKKWRNAQ
DNYERQVILQSETIQELTKTSQALDSAQKGASELRKVVDVLETENAELKSKWETERLAIE
VYRNEADKRYAEINELNKILHCRLEALHIKLAEKEKGIASGSDSKNLGDDDGLQNVLSYL
RRSKEIAETEISLLKQEKHRLQSQLESALKSAESAQTLLQTEREKSRASLYTEDEFQSLQ
LQVRELTLLRESNVQLREENRHNFEECQKLRETFQNAKIEIENLEKLLKNRDRDLEAYRK
EIEIFKAEKTHLENRIDELVQKCKEVDANEYNQLKEAFQQIQMSLGEKDSQLEEVKKHLS
EKQETLSVLERDLARSKTEVGERENKINEVSQTAASLKSESDKFKRINYHFKRKVDNLEK
EKQEMSKEVQSLSKQLDEARQALSKQLEEAKLVKRTSVDSGGEHMLREKAKDTRIQTLEK
ILEKQRDELKKEKEDHLKEKEKFQNIRKMITDSHGNVNQEKMRLSDDLTKHKLALKALQD
EVEKIKNPGSSQSENASGVPHFSSNILDDFASAYFQAVDNFEQLAQSACTGPDSTTGPDS
TTTDAPPLDNATSVAVPPGQALSSFQTPEPPAASVPAARAEEKERRPALTKATLKMGRKL
VRPNITKPKDPQGDVEMTEGVESNTGLPSHSTETQGTVTAPTKASARKRMQEEMLTSEET
ASDVPAPLPKKPKAPDTLQVASDELAAAPTKLPEAVITVESSDDVGNLQQGKEEVVEKDE
LDTGGDQTEEPLEDDEFSETVDATDEDLEKPTDTIISDDQLRDQTEQDIQRIVVESGGEK
DEGEQLVRDFTDNDGDSSAINETGGPGNEEFQSEQSTDPEKSPSIEPLGMEAGETNPAQT
LEEDKIGDLNEPIAETDSSDKLNHGADSTAETNRAPGSSNPPSEEVSTSTAVATVDAGSS
DQAGSTPPQDAGGKPVSPLNSGSTTINLQERAKQRAQMRQAGMGGATSSPARGRGRIRGR
SVRGGRTGRGQSPG
NT seq
6165 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttttcgtatctgacgaagaattccggcggtgctcgcacgatgcagcgattttg
acggagaaggcggacgatttcatccgtggactcttcaatcaaatagagacggtgaaggcg
gaggccgacgccgcctccattactctcgagcagacgtgcgctctcaacgaacaaaaatac
gtttccctttccgcggagtactcctccctcctgctgcacaactccgagataaatgctttg
ctcgaaaagcgcgatgctgaaatcgcggagctgaaagtcgagaagcagcgatttctcctt
cagtctattgaaaaggatggggaggtagagaggttgatgagggaagcatcagagcttcat
cgatcgaagaggcaactgttggagttggtggaacaaagggacttggaaatcaacgagaaa
aatgccacaataaagagttatcttgataaaattgttgatttgactgaaaatgctgcatca
aaagatgcacagataagagacctagaatctgaatcggggcgattacatgcaacaacagac
cgtattttacaggagaaggagcttcttgagaggcataattcatggcttaatgaggagttg
acgactaaggttaataatctgatccaggttcggaaagaatatggagaacgtgaagctgat
gtttctggtaaacttgcagatgttgagcaaaaattgaaggacagtgccaattctttgaaa
tttcacaaagaccgagcgagggagttggaggagaaactggcatcggtggaaagagagttg
ttgtcaactaaagatgctgctgcatgtgctgagcaacgttccttggccgaaatttcaaca
gtaaccaaacttgttgacttatataaagaaagttcggaggaatggtccaagaaggcagga
gaacttgagggagtcatcaaggctcttgaaactcacttaaatcaagttgaagctgaatat
aaagataagcttgataaagaagtgtctgcgaggaaggaagtggaaaaggaatctactgat
ttgaaatatcagctagagagttgccaaacagaattggagaagttaaaaagaagaaatgag
cttcaacatcttccattgagtagttttacaactggcttattgacaaattcagttgacgat
gatgaaatggttttggatgatcgagcaattattcctagcattcctgccggagtttctgga
accgcattggcagcttcacttcttagggatggatggagtctggggaaaatatatgccaaa
tatcaagaggctgttgacgctcttcagcatgaacagttggggagaaagcaatcccaagct
atattggagcgtgtactttatgaaatagaagaaaaagctggagtaattatggatgaaaga
gaagaacatgaaacacttgtcgaggcctactctgctttagatcagaaactgcagcagaca
ctatctggacattctactctggagattaccattcaggagctcaaggctaagttaaagagg
caggagcgtgacttcgcggttgctcagaaggagattgttgagctccagcaacaggtggct
gtactgttaaaagagtgtcgagatgttcagttgcgttgtggatcagttacccgttatcaa
gatgatgagctcattagtggtttttctgtgccagcgggttctgaatccagagctgagaac
atcatattagaccacctgttaaccttcaaagacataaatggattagttgaacagaatgtc
cagctgcgcagtcttgttcgcaatttatctgatcagattgaagataacggagcagagttg
aaggaaaaatatgagaaggagcttcagatgcatatggaagagactgcgtctaaggttaat
gcggtattgttaagggcagaggaacaggagagcatgattgagtcacttcatacctctgtg
gccatgtacaagaagctgtatgaagaggagcaaaaactccatgcttatcctactcatctg
cctgaaacagttccagagcgaggaagcagggagattatacctatacaagaaagtatccat
gagacatcaagaaagcatgaacatacattagagcgcctgagaagtctggaagaggatttg
gcgaagtccaagaatgatatcatatcattgcgatctgatcgcgataaattgcaaatggta
gcgacttttgcagaagaaaaacttgccaggtttctgaaggagtttgagcaacagagggaa
gagcataatggaattagagcaagaaatgttgagttctctcagataatagttgactaccaa
aggaaactctgcgaaagtgctgagtcattggatgctgccaatgaactatctaggaagtta
acaatggaggtatcaattttgaatcaagaaaaagaaatgcttcataactctgagaagaga
gcgtctgatgaagtttgtagtttgagtgagagggttcatcgccttcaggccactttggac
accatgcggagtgctgaggaagtgcgtgaggaggctagaggtgttgagaggagaaaacaa
gaagattatgtaaacaaaatcgagagagaatgggccgaggcaaaaagagaacttcaggaa
caacgggatcttgttcggaacctttctcttgagcatgatagtgacttgaaggatgcacga
aaacaagttgacgagttgaataaagaattagctaatgctttgcgatctgtggcaaatgct
gaatctagagcagcaattgcagaggctcgttattctgatctggagaagattgtggaatct
acaaggacaaaggattccgatggtgttgatagtggactatcttcttcttctactgaaaag
atgttggcaaaattccgggatgaaattcagaaattaagggaggaagctgaggcaagcaaa
aatcacatgcttcagtacaagagtgttgcacaagtcaatgaagaagctctcaaacaattg
gaggtggcacatgagaattttaggaaagaggctgatgaatttaagaggtctctagagaat
gaggttcatttgctcagggagcatgttactgaacttgacagtgaatgtaaactgaagact
gaagaggctatttctgcaaattctgggaaagaagaggctcttgctggtgctttgtttgag
attgccagtgtgaaggatgactattctgttaaaatgtcacagattgtggtaatggaatcc
caaatctctgcattgaaagaagagttggagtcagaacataagaaatggcgaaatgctcaa
gacaactatgagagacaggttattctacagtcagaaaccattcaagagctgacgaaaact
tcacaagccttggattctgcacaaaaaggggcatctgagctccgtaaagtggtggatgtg
ctcgaaacagaaaatgcggagctgaagtctaagtgggagacggaaaggttagctattgaa
gtatacaggaatgaagcagataagaggtatgctgaaataaacgaactgaacaagattttg
cactgtcgacttgaagccttgcacattaagttggctgagaaggagaaaggaatagcttct
ggaagcgattccaagaaccttggagatgatgatgggttgcaaaatgttttgagctatctc
cgacggtcaaaggaaatagctgaaacagaaatctcattattgaaacaagaaaagcatcgt
ttgcaatctcagttagagagcgctttgaagtcagctgagtctgcacagacattgcttcaa
acagaacgcgagaaatcacgggcatcattgtatacagaggacgaattccaatctcttcaa
ctacaggtcagagagctaactttattgcgtgaaagcaatgtgcaactcagagaggaaaac
cggcataattttgaagaatgccagaaacttcgtgaaacatttcagaatgctaagattgaa
attgagaatttggagaagcttcttaaaaacagagacagagatctggaagcgtacagaaaa
gaaattgaaatctttaaggcagaaaaaacacatcttgaaaacagaatagatgagttggta
cagaagtgcaaggaagttgatgcaaatgaatataatcagttgaaggaagctttccagcag
attcagatgagtttaggggaaaaagatagtcagttggaggaggttaagaaacatttatca
gaaaagcaggaaacattatcagttctagagcgagacctagctagaagcaaaactgaggta
ggtgaacgagagaacaagattaatgaagtctcacaaactgcagcttctctgaaatctgaa
tctgataaatttaagcggataaattatcactttaaaaggaaggttgataatcttgaaaag
gagaaacaagagatgagcaaagaggtccagtctttgtccaaacaattagacgaagctaga
caggccttgtcgaaacaactggaggaggctaaacttgtaaaacgaaccagtgtcgattcc
ggaggagaacatatgctgagggaaaaggcgaaagataccaggattcaaacactagaaaaa
atactggagaagcaaagagatgaactgaagaaagaaaaagaagaccatcttaaagaaaaa
gaaaaatttcaaaacatccggaaaatgataactgactctcatgggaatgtcaatcaggaa
aagatgagactctcagatgatcttacaaagcataaattagctttgaaagcacttcaagat
gaagtggaaaaaataaagaaccctggaagcagtcaatcagagaatgcatctggggtccca
catttctctagtaatatattggatgattttgcttccgcctatttccaggctgtggataat
tttgaacaattagcacagtctgcttgtactggtccggattctactactggtcccgattct
accacgaccgatgctccacctcttgataacgcaacatctgttgcagttccccctggtcaa
gccttatcatcattccaaacccctgaacctccggctgccagtgttcctgcagctagagct
gaggagaaagagagaagacctgctttaacaaaggcaaccctgaaaatgggaaggaagctg
gtgcgtcctaatattacaaagcccaaggatcctcaaggggatgtggagatgacagaagga
gtcgaatctaatactggattaccatcccatagtacagagactcaaggaactgtaacagct
cccacaaaagcatctgcacgtaaacgcatgcaagaggaaatgctcacttcagaagaaact
gcctctgatgtcccagcacctttacctaaaaagccaaaagctccagataccctacaggtg
gcaagtgatgaactagctgctgctcctacaaagcttcctgaagctgttatcactgtcgaa
tcatcagatgatgtgggcaaccttcagcaaggtaaggaggaagttgttgaaaaggatgag
cttgacactggaggagatcaaactgaggagccattagaagatgatgagttcagtgaaaca
gtcgatgccacagatgaagacttggagaaaccaactgacactataatatctgatgatcaa
ttgagagatcaaaccgaacaagatattcagcgcatagttgtagagtcaggtggtgagaaa
gacgagggggagcagcttgttagagattttactgacaatgatggtgatagcagtgcaatt
aatgagaccggagggccaggaaatgaagaatttcaaagcgaacaatcaactgatcctgag
aaatcacctagtattgaaccattgggcatggaagctggggagactaatccggcccagaca
cttgaggaagataagataggcgacttaaatgagcccatagctgaaactgacagttctgat
aagcttaaccatggtgcagattctaccgcagaaaccaacagggcacctggttcgtccaac
cctccatctgaggaagtatcaactagcactgctgttgctactgttgatgctggatcttca
gatcaagctggatcgactcccccacaggatgctggtggaaaacccgtgtcacctttgaac
agtggttcaacaaccattaatctacaggagagagcaaagcagcgagcacaaatgagacag
gctggcatgggaggggctacttcttcaccagccagaggtcgtggccgaatccgtggccgt
agtgtacgaggtggccgcactggacgtgggcaatcacccggctaa
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integrated database retrieval system