Salvia splendens (scarlet sage): 121785711
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Entry
121785711 CDS
T07627
Name
(RefSeq) transcription initiation factor IIE subunit alpha-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121785711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121785711
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
121785711
Prokaryotic type
Archaeal type
TFE
121785711
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
wHTH-PRTase_assc
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
121785711
NCBI-ProteinID:
XP_042040056
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All DBs
Position
22:4575729..4580935
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AA seq
474 aa
AA seq
DB search
MASVDPFNRLVRLTARAFYADITTKGENQQRPGRSDNRGIAVVILDALTRRQWTKEEDLA
RDLKLHTKQLRRTLRFFEEEKLVTRDHRKETSKSAKMFNAAVAATVDGQKNGRDDEKQKL
QTQSYCCLDYSQIYDVVRYRLHRMRKKLKDELESKNTVQEYICPNCNKRYNALDALRLIT
PYDEYFHCESCNGILVAESDKLAAQEMGDGDDNASRRRLDKLKDMLSKMEVQLKPLIDQL
GRVKDLPVPELEGLQAWLVRKATQQAANGDHNTNNPNRHMNGGFGGTPMPYVGETKVEVA
FSGEDDKGDVKSISASTPMKVLPPWMIKQGMNLTKEQRGETSQETKMGGSSVALESTDDK
KAVALDEDKNNIQDEYVRAYYAAVLKKLHGKEENVKREAESPNDVIASEVYNAPSERQVG
KKSKREDEFEGDDIEWEEDGPSTGNTSDHFKVHDLNVEAEATQDDEDENDWEDG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgtcgatccattcaatcgcctggtgagacttacagcccgggcattctatgct
gatataacgacgaagggtgaaaaccagcagaggcctgggagaagtgataacagagggatt
gctgtggtcattcttgatgctcttactagacgtcagtggactaaggaggaagatttggct
agggacttgaaacttcacacgaagcaactacgtcggactctcagattcttcgaagaagaa
aaactggtcactcgtgatcatcgcaaggagacctccaaaagtgcaaagatgttcaatgct
gcagtggctgccacagtggatggtcaaaaaaatggtagagacgacgagaagcaaaaattg
caaactcagtcatattgttgcttagattattcacagatatatgatgttgtcagatacaga
ttacatcgcatgaggaagaagttgaaggatgaactggagagcaaaaacacagttcaggaa
tatatatgcccaaactgcaacaaaagatacaatgcccttgatgcactccggttgatcacc
ccatatgatgagtactttcactgtgaaagctgcaatgggatccttgtggctgagagtgac
aagctggctgctcaagaaatgggcgatggggatgataatgcaagcagacgtcggcttgat
aaattaaaggacatgctatcaaagatggaggtacagctcaaaccactgatagatcaactt
gggagagttaaggatttgcctgtgcctgaacttgaaggtcttcaagcttggctagttcga
aaggctactcaacaagctgcaaatggagatcataataccaacaaccctaacagacatatg
aatggaggttttggtgggactccaatgccttatgttggggagactaaggttgaagttgca
ttttctggtgaggatgacaaaggtgatgttaaatcaatcagcgcgagtacacctatgaag
gttttgcctccatggatgatcaagcaaggaatgaatcttacaaaagaacaacgtggagag
accagtcaagagacaaagatgggtggtagttcagtagctttggagagtaccgatgacaag
aaggctgtagctttagatgaggacaaaaataatatacaggatgaatatgtcagagcctat
tacgctgctgtacttaagaagctccatggaaaagaagaaaatgtcaagagagaagcagaa
tcacctaatgatgtcatcgcaagtgaagtttacaacgcaccatctgagcgtcaagtaggc
aagaagtcaaaacgtgaagatgaatttgaaggagatgatattgaatgggaggaggatggg
ccatctacaggtaacacttccgatcactttaaagttcatgacttgaacgtagaagcagaa
gctactcaagatgacgaggatgaaaacgactgggaggacgggtga
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