Salvia splendens (scarlet sage): 121785724
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Entry
121785724 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121785724
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121785724
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121785724
Protein phosphatases and associated proteins [BR:
sspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121785724
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121785724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
CoV_nucleocap
RRM_occluded
SDP_N
Motif
Other DBs
NCBI-GeneID:
121785724
NCBI-ProteinID:
XP_042040074
LinkDB
All DBs
Position
22:complement(19238945..19242027)
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AA seq
238 aa
AA seq
DB search
MADSPRKRYVRSPSPWEENSRSRSRSRSKSRSWSRPRERSRSRSRSRGRGTGREEVVNDG
TTLYVTGLSTRVTEKELEDHFSKEGKVKSVFLVVEPRSRVSRGFAFVNMVTSDDANRCIK
HLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKSSRGDGYGDRGRYRGGSSREDYGYRR
SPRRSPYRGGRDYSPRGGRDYSPRHSPYGGSGRSRRERSRSYSPPRHSPERNYARGSR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctccgagaaaacggtatgtacgttctccttctccatgggaagaaaattcg
agatccaggtcaagatctaggtccaaatctagatcatggtcaagaccaagggagagatct
agatcaaggtctaggtcaagaggtcgtggcactggcagggaagaagttgttaatgatgga
actacactttatgttactggcctatctacaagggtcactgagaaagaacttgaagatcat
ttctcaaaggaaggaaaggttaagtccgtctttttggttgtggagcctcgatctcgtgta
tctcgtggatttgcttttgttaatatggtcacttcagatgatgctaatcgctgtatcaaa
cacctcaatcagtccgtgcttgaaggccggtacataactgtagagaggtcacggcggaaa
cgtgcaaggactcccactcctggtcattatcttggtctgaaaagttcacggggtgatggt
tatggtgatcgaggaaggtatcgtggaggatccagccgcgaagattatggctacaggagg
tctcctagacgctcgccatatagaggtgggcgtgattactctcccagaggtggacgagat
tactcccccagacattctccttatggtggaagtggaagatccagaagggaaaggtccagg
tcatactctcctccccgacacagccccgaaaggaactatgcacgtggttctaggtga
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