Salvia splendens (scarlet sage): 121785745
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Entry
121785745 CDS
T07627
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121785745
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121785745
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Thg1C
Ig_DR_A0283-like
Motif
Other DBs
NCBI-GeneID:
121785745
NCBI-ProteinID:
XP_042040096
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Position
22:18096861..18100989
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AA seq
666 aa
AA seq
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MAKCRRPPSLHQWPIIILCFFFLFTMIHAASVRRLVPMSKQESSPPVKLHVTDTHVEIDN
GIVKLTLMNPSGLITSIGYKGVDNILEYRNAEGRRGYWDIVWSRPDRNGSHFDTLYCTSL
RVIVESDDQVEISFTKRWDRSLDGEVPLNIDKRYILLRGSSGFYTYSIFEHMEGWPDLNI
DEARIAFKLHQDMFHYMVISDNKQRIMPSDNDRRVGDTLDYREAVLITHSSNPRLRGEVD
DKYQYSCNNEDNHVHGWISSTDQHVGFWVVMPGDEFRGGGPVKQDLTSHAGPTSLATFFS
AHYAGVNYGVRLRNGEHWKKVFGPIFVYLNSDRNNNSTAIWEDAKRQTVKERKKWPYDFP
QSPNFPDANQRGAIRGRLRVQDKETAVAKSAYVGLAPPGDVGSWQDDSKGYQFWTRTDDR
GYFSIKGVRPGTYNLYAWVPGVIGDYKYHGDITIRPGEQVQIGDAVYTSPRNGPTLWEIG
IPDRTAAEFYVPDPNPLLVNKIFINHPEKYRQYGLWNRYTDLYPHHDLVYTVGASDYRKD
WFFAHVNRHVNNEYVPTTWQIVFNLGKVARRGNYTLRIALASSSLAEIQVRINNNNNNQR
SHFSTGRIGRDNAIARHGIHGLYKPYSVTISGCLLVEGRNTIYLRQSRGGNPFTGVLYDY
IRLEGP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtgtcgacgaccaccatcgcttcatcaatggccaatcattatactatgcttc
ttcttcctttttactatgatccatgcagccagtgtaaggagattagttccaatgagtaag
caagagtcatcacctccagtcaagctccatgtaacggacacccatgtggagatagacaac
ggcattgttaagctaacattaatgaacccgtccgggttgatcacaagcatcggatacaaa
ggggttgacaatattctcgagtatcgtaacgcagaaggccgaagaggatattgggacatt
gtgtggagcaggccagatcggaacggaagccattttgacacgttgtattgcacaagcttg
agagttatagtagaaagtgatgatcaagttgagatttcattcacgaagagatgggatcgc
tcgcttgatggagaagtgcctctcaatatcgacaaaaggtatattctcctgcgcggatct
tctggtttctacacttactcgatattcgagcatatggaaggatggcctgatctcaacata
gacgaagcaagaatcgccttcaagcttcaccaagacatgtttcattacatggtaatatca
gacaacaagcagaggatcatgccatctgacaatgacagaagagtaggggatacgcttgat
taccgggaagctgttctgataacgcattcgagcaaccctcgactaagaggagaggtggat
gacaagtaccagtactcgtgtaataacgaagataaccacgtgcatggctggatcagctct
acagaccagcacgttggattttgggtggtgatgccaggtgatgaattcagaggcggcggc
cctgtcaaacaagacctcacatcacatgccggcccaacttccttagctacgtttttcagt
gcacattatgctggtgttaactatggagttagattgcgcaatggagagcattggaagaag
gtgttcggccctattttcgtttacctcaactcagatcgcaacaataactctactgccatt
tgggaagatgccaagagacagacagtaaaagagaggaagaaatggccttatgatttccca
caatcaccaaattttccagatgccaatcaacgcggtgcaatccgcgggcgtctgcgagta
caagataaggaaaccgcggtagcaaaatcagcatatgtgggattggccccacccggagat
gtaggatcttggcaagatgactctaagggctatcaattttggacacgaacagacgacaga
ggctacttcagtataaaaggtgttagaccaggcacatacaacttgtacgcttgggttccg
ggtgtcattggagactacaaataccacggcgatattacaatccgaccaggtgagcaagtt
caaataggcgatgctgtgtacactagtcctagaaacggaccaacgctctgggaaatcggg
atccctgatcgcactgcagccgagttctatgtcccggatccaaaccctctcctagtaaac
aaaatattcatcaaccacccagaaaagtacaggcaatatggcctgtggaacagatacaca
gatttgtatcctcatcacgatctcgtttacactgttggagccagcgattatcgcaaagac
tggtttttcgcccatgtaaacaggcatgtgaataatgagtatgtcccaacaacatggcaa
attgtattcaacttaggaaaggtggcgaggagaggaaattacacgctgaggattgcgttg
gcatcttcgagtttagcagaaatacaagtacggatcaacaacaacaacaacaaccaacgg
tctcatttctcaacggggaggattgggagagacaacgcgattgcgaggcatgggatacat
gggctttacaaaccgtacagtgtaacgatatcggggtgtctgttggttgaaggaagaaat
acaatatatctgaggcaatcgcgaggtggaaacccgttcaccggtgttctgtacgactac
attcgcctagaaggcccgtga
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