Salvia splendens (scarlet sage): 121785828
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Entry
121785828 CDS
T07627
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121785828
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
Other 90S particles
121785828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
121785828
NCBI-ProteinID:
XP_042040218
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Position
22:complement(5635927..5639807)
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AA seq
513 aa
AA seq
DB search
MKGGKNLKRRPSNPANGRSKRLSAIHDDSFFEATEQKRRRKFDNDEEIKSSDDSDSDSDS
EKEAEEKEEEIEETPAEKRKRLADAFLEKLRAKERETEENEESEEEGEGRREREGERDTL
IAKILQQDQLEESGRVRRALASRVQKPEASEGFRFLVKHRQPVTCVALSEDDSRGFSSSK
DGAIVHWDVETGKAEKYLWPSDEVLKAHGLKDPQGRAKKQSKQVLALAVSSDGRYLASGG
LDRHVHLWDVRTRQHLQAFPGHKGPVSCLTFRQGTAELFSGSFDRSIKIWNAEDRTYIST
LFGHQSEVLTIDSLRKERVLTVGRDRTMHLWKVPEESQLVFRAPASSLECCCFINNDDFF
SGSDDGNVELWNALRKKPVHIVKNAHVSCSENKSDQNNLEGISNGHKENEAQNSSRNGSA
ALSWVSSVAVCRSSDLAASGAGNGLVRLWAIENESKGLRPLFELHLDGFVNSLAFAKSGK
FLIAGVAQEPRLGRWERAASAKNGVALHPLKLS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcggcaaaaatctgaagaggaggccgtcaaatccggccaacggcagaagcaag
cggctctctgccatccacgatgattcctttttcgaagctacggagcagaagcggcgccgt
aaattcgacaacgacgaagagattaagagtagtgacgattccgattccgattccgattcc
gaaaaggaggcggaggagaaggaggaggagatagaggagacgccagcggagaagcggaaa
cggttggccgacgcctttctcgagaagctcagggcgaaggagagggaaaccgaggaaaat
gaggaatcggaggaggaaggtgaagggcggagggagagggaaggcgagagggatactctc
attgcgaagattttgcagcaggatcaactcgaagagagcggccgcgttcgacgagccctt
gcttcgagggttcagaagcccgaggcgagtgaaggatttcgatttttagtaaagcatcgg
caacccgtcacttgtgtggctctatctgaggatgactctagaggattttcgtcttccaag
gatggtgccattgttcactgggatgttgagactgggaaagccgaaaagtacctctggcct
tctgatgaagttttgaaggctcatggtctgaaggacccgcaaggtcgtgctaagaagcaa
agtaaacaggttctggcattggctgttagctctgatggtcggtatctagctagtggaggc
cttgatcggcatgttcatctgtgggatgttcgcacacgccagcatcttcaggcttttccg
ggacataaaggacctgtttcttgcttaacatttaggcaaggtactgcagagctcttctct
ggctcatttgatcgttctatcaagatttggaatgcagaagatagaacttacataagcaca
ctatttggtcaccagagtgaagttttaaccattgacagcttgagaaaagaacgtgtattg
actgttggacgtgaccgtaccatgcatttgtggaaggtaccggaagaatcacaattagta
tttcgagctccggcatcttcactagagtgctgttgctttattaataatgatgatttcttc
tcgggttctgatgatggaaatgttgagctctggaatgctctacgcaagaagcctgtccat
attgtaaagaatgcacacgtctcatgtagtgaaaacaagtctgatcagaataatttggaa
gggatctcaaatggccataaagaaaatgaggcccaaaattcatcaagaaatggttcagct
gctctttcctgggtcagctcggtggctgtctgtagaagcagtgatcttgctgcttcagga
gctggaaatggattagtgcgcctttgggctattgaaaatgagtctaaaggccttcgtccc
ttatttgaactccacttggacggatttgtaaattctttggcatttgcgaaatctggaaag
ttcttaattgctggggttgcacaggagcctcgattgggaaggtgggaacgtgctgcttct
gctaaaaacggagttgcattacatcctttgaagctgtcatga
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