Salvia splendens (scarlet sage): 121787002
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Entry
121787002 CDS
T07627
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121787002
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sspl01002
]
121787002
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121787002
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121787002
Peptidases and inhibitors [BR:
sspl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121787002
Ubiquitin system [BR:
sspl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121787002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
UCH_1
MATH
Nitroreductase
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
121787002
NCBI-ProteinID:
XP_042041538
LinkDB
All DBs
Position
2:8568686..8585626
Genome browser
AA seq
1126 aa
AA seq
DB search
MTVIASPAPNEQEDEDMLVPRSDLVEGALPIGVEGPLPMGAEAPEATENNVENQPTEDPR
TAKFTWKIEFFSKITTKKLYSGIFDLGDYKWRILIFPKGNNADQLSMYVDVADSAGLPYG
WTRYAHFSLAIVNQVHSKYSVRKETQHQFSARENDWGFTAFMPLRDLHDPSRGYLVNDTC
IVEAEVAVYKAMDPWLYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPFFRKVVYHMPTN
VIDMPSASIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDAFLQHDVQELNRVLCEKL
EEKMKRTIVEGAIQQLFEGHHMNYIECINVDYKSSRKESFYDLQLDVKGCDDVYASFDKY
VTVEHLDGDNKYHAEQHGLQDAKKGVLFIDFPPVLQLHLKRFEYDFVRDVMVKINDHYEF
PLQLDLDRDDGKYLSPDADRRVRNLYTLHSVLVHSGGVHGGHYYAFIQPTLSSQWYKFDD
ERVTKEDMKKALDELYGGEEEHLMQTNQGINNTPFKFTKHSNAYMLVYIRESDKDKIMCH
VDEKDIAEHLRERLKREQEEKEQKKKEKAEAHLYTIVKVVCDEDFVWQIGRNVFFDLVDH
DKVRSFRVQKLMPFNVFKEEVANKFGIPVQLQRFWLWAKRQNHTYRPNRPLTQSEEAQTV
GYLRDMSNKAQNAELRLFLELERGPDCRPITLPNKAKDDILLFFKLYDPEKEELRYVGRL
FVKSFGKPVDILSRLNEMAGYAPEEDIELYEEIKFDPNVMCEHIQKILTFRSSQLEDGDI
VCIQKSLPSEARQQLRCPDVRSFFEYRHNLQVIHFRSLEKPKDDEFCLQLSKLDTYDEVV
EKVAHQLGVDDPSKLRLTSCNSYTQQPKPHPIKYRGVDNLLDMLLHHNQTSDILYYEVLD
MPLPELQGLRTLRVAFRHGTNNEVEIHNVRLPKDSTVADLLDDLRMKVQLSRPDAELRLL
EVFTHKIYKIFSSGEKIESINDNYWTLRAEEILEEEKHLGRLDCLIHVYHFMNEEYQNQV
KIQNFGEPFLLVIHADEILADLKIRVQKKLCVSDEEFSKWKFAFVSQGQTEYLEDSEILF
TRFQTSSMYIAWEQYLGLEHIDNAPKRPLAANQYRPPFEKAVKIYN
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatagcgtctcccgccccgaatgagcaagaggatgaggacatgttagttcct
cgatcagacttggtggaaggggctctgccaataggagtggaagggcctctgccaatggga
gcggaagcaccagaagcaacagaaaataatgtggaaaaccagccaacagaggatcctcgc
acagcaaaatttacttggaagatcgaatttttttccaagataactactaagaagctctat
tctggaatatttgatctcggtgattacaaatggcggattcttatttttccgaaggggaac
aatgctgatcaattatccatgtatgtggatgttgctgattcagccggtttaccgtatgga
tggactagatatgcccatttcagtttggctattgtgaatcaagtccatagcaagtattca
gtccgaaaggaaactcaacatcaattcagtgcccgagaaaatgattggggctttacagcc
tttatgccacttcgtgatcttcatgatcctagcaggggttatcttgtcaatgacacctgt
atagttgaagctgaggttgcggtgtacaaagctatggatccatggctatatgattcgaag
aaagaaactggtttcgtaggactgaaaaaccaaggggctacctgctatatgaactctctt
ctccaaactctgtaccatattcctttcttcagaaaggttgtgtaccatatgcctactaat
gttattgatatgccatctgcaagtatccctctggctctgcagagtttattttacaagcta
cagtacagcgataatagtgttgcaacaaaggagttgacaaaatcctttggatgggacacc
tatgatgctttcttgcaacatgatgtacaagaactcaatagagttctttgcgagaagctt
gaagagaaaatgaagagaaccattgtggaaggtgccatacagcagttatttgaagggcac
catatgaactacatcgagtgcattaatgtagattacaaatccagtagaaaagagtcattc
tatgatcttcagctcgatgtcaaaggctgtgatgatgtctatgcttcttttgacaaatat
gttacggttgaacatctagatggagataacaagtaccatgctgaacagcatggtttgcag
gatgctaagaaaggagtgctattcattgacttccccccagttctccagcttcacttaaag
cggtttgaatacgactttgtgcgtgatgttatggtaaagataaatgatcactatgagttt
cctcttcaacttgatcttgatagagatgatggaaagtacttgtcacctgatgctgataga
agagtacgtaacctctatacacttcacagtgttttggtccatagtggtggtgtgcacggt
ggtcactattatgcctttatacagcccactctttccagccagtggtataagtttgatgat
gaacgtgtgacaaaagaagatatgaagaaggcattagatgagctgtatggcggtgaagaa
gaacacctgatgcagacaaaccagggaatcaacaatactcccttcaagttcaccaaacac
tcaaatgcttatatgctggtgtatatacgtgaaagtgacaaggataaaatcatgtgtcat
gtcgatgagaaggatattgctgagcatcttagggagaggctgaagagagaacaagaagaa
aaagaacaaaagaagaaagaaaaagctgaagcacatctttacactattgtaaaggttgta
tgtgatgaagattttgtttggcagattggaagaaacgttttttttgatttagtcgatcat
gataaagttaggagcttccgtgtccagaagctgatgccatttaatgtttttaaggaggag
gttgcaaataaatttggtatacctgtgcaattacaacgcttctggctgtgggcaaaacgg
caaaatcacacttatcgtcctaaccgtccattgacacagtctgaggaagcacagactgtt
gggtatctgagggatatgtctaataaagctcagaatgcagagttgaggctattcttagag
ttagaacgtgggccggactgccggcctatcactctccctaataaggcaaaagatgacatt
ttgttattcttcaagctttatgatccagaaaaggaagagcttagatatgttggtagactt
tttgtgaagagctttgggaagccggtagatatcttgtctagactaaatgagatggctggc
tatgctcctgaggaagatattgagctttatgaggaaataaaatttgatcctaatgtgatg
tgtgaacatatccagaagatactcacttttaggtctagccagcttgaggatggggacata
gtttgcattcagaagtcccttccaagcgaagctcgccagcaacttcgttgcccagatgtt
cggtcattctttgagtaccgccataatctccaagttattcattttcggtccctagaaaag
cctaaagatgatgaattttgtttacaactgtcaaagcttgacacatatgatgaagttgta
gagaaagttgctcaccaacttggagtggatgatccttctaaacttagacttacgtcatgc
aattcatacactcaacaaccaaaacctcatcctataaagtatagaggagtagataatttg
ctagatatgttgctgcatcacaatcaaacttctgatatattgtactatgaagtcctggat
atgcctctgccagaattgcaaggcttaagaacgctcagagtggctttccgtcatgggaca
aacaatgaagtggaaattcacaatgttagactgcctaaggatagcactgtggctgatttg
cttgatgatctcaggatgaaggttcagctgtctcgtcccgatgcagaactcagactgctg
gaagtattcactcacaagatctacaagatattttcttcaggggaaaagatagagagcata
aatgacaactattggactttacgagctgaagagatacttgaagaagagaaacatcttggt
cgtcttgattgcttgattcatgtttatcactttatgaatgaagaatatcagaaccaagtg
aaaattcagaattttggtgagccctttttattggtcattcatgcagacgagattttagct
gatctcaagattcgtgttcagaaaaagttgtgtgtatcagatgaggagttctctaagtgg
aaatttgcttttgtttcacaaggtcaaactgagtacctagaggattcagaaattttgttt
actagattccagacaagcagcatgtatattgcttgggagcagtatcttgggctggaacac
atagataatgccccaaaaaggcctcttgcagctaatcagtaccgtccaccatttgagaag
gctgtgaagatatacaattaa
DBGET
integrated database retrieval system
