Salvia splendens (scarlet sage): 121787078
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Entry
121787078 CDS
T07627
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121787078
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
General mRNP proteins
121787078
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
121787078
NCBI-ProteinID:
XP_042041631
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All DBs
Position
22:2508198..2515277
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AA seq
619 aa
AA seq
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MDFDEYDYLEKAVEETNGSPKETPETEKERERSEKGYRRRDRSEDDELDEEEKERRSSSK
KSRNGDSSREREKDKGRDVDRDRERERDRDRDRDRDRDRERDKDRDRDRERSSRHRSGER
DSERERRSSREKDKDRERDRDRGKERKERDGDKEKERERRDRDKERERERRSRSRSQVDR
DGERERRSHSRSRLDRDRERDVERRSRSRSRLDRERERELLRDKEREESRRFKDKREAVE
PEADPERDQRTVFVYQMPLKATERDAFEFFSQAGKVRDVKLIMDRNSRRSKGVGYIEFYD
AMSVPMAIALSGHLFLGQPVMVKPSEAEKNLVQSNTSAGGSVTGPYGATDRKLYVGNLHF
NMTEFQLRQIFEAFGPVELVQLPTDPETGHCKGFGFVQFGQLEHAKAAQSLNGKLDIAGR
TIKVSSVTDHVGVQDSGTKTADFDDDDGGGLALNAQSRAMLMAKLDRSGIASSVVGTLGV
PAFNGAAPSQQAITMPINPTAVLPNAVLPAQAVSMAPEPIGTPSECLLLKNMFDPATESD
PEFDLDIRDDVQEECSKYGRVKHAYVDKNSAGYVYLRFESVEAASRAQQAMHKRWFARRL
ISAIFLQPYEYDAKFKGAP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgactacctcgagaaagcggtggaagaaaccaatggctcaccg
aaggagactccagagacagagaaggagagagagaggagcgagaaggggtacagaaggaga
gacaggagtgaagatgatgaactcgatgaagaggagaaggagaggagaagcagtagcaag
aaatcgaggaatggtgacagcagccgtgaaagagagaaggataaaggtagggacgtggat
agggatcgcgaaagagaaagggatagggacagggacagggacagggacagggacagagaa
agggataaggatagagacagagacagagaaaggagctcgaggcatcggagtggagaacgg
gattcagagagagagaggcggagctcgagggagaaggataaagatagggaaagggatagg
gatagaggcaaggagaggaaagagagggatggagataaggaaaaggagagagagaggaga
gatagggataaggaaagggagagggagaggaggagccgcagcaggagtcaggtagaccgt
gacggagagagggagaggaggagccacagcaggagtcggttagaccgtgacagagagagg
gacgtggagaggaggagccgcagccgtagtcggttggaccgtgaaagagagagggagttg
ttgagggataaggagcgtgaggagagcaggagattcaaggacaaaagagaagctgtagag
cctgaagccgatccagagagggaccagagaactgttttcgtgtatcagatgcctctgaag
gcgaccgagagggatgcatttgagttcttttcacaagctggaaaggtcagggatgttaaa
ttgattatggatcgaaactcgaggagatccaaaggagttgggtacattgaattttatgat
gctatgtctgtaccaatggctatagctttatctgggcacctatttcttggacaacctgta
atggtgaaaccttcagaggctgaaaagaatcttgttcaatcaaacacttctgctggtggg
tcagttactggaccatatggtgcaacagacaggaagctttatgtaggaaatttacatttc
aacatgacagagtttcagctcagacagatttttgaggcttttgggcctgttgagcttgtt
caactaccaacagatcctgagactggacattgcaaaggtttcgggtttgtccaatttggg
caacttgaacatgcaaaggcggcacaaagtttgaatgggaagctagatattgctggtcgg
accattaaggtatcctcagttactgatcatgtcggagttcaagattctggaacaaaaact
gcagattttgatgatgatgatggaggtggtttggctctgaatgctcaatccagagctatg
ctcatggcaaagctcgaccgcagtggtatagcttcaagtgttgtagggacccttggagtg
cctgccttcaatggagcggctccttcacagcaagctatcaccatgcccatcaatccaaca
gcagtccttccaaatgcagtccttcctgcccaggctgtttccatggctccagaacctatt
ggaacacccagtgaatgtttgttgttgaagaatatgttcgatccagccactgagtctgat
cctgagtttgatctggacattagagatgatgtgcaagaagaatgttccaagtatggtcgt
gtgaagcatgcatatgttgacaagaacagtgccggttatgtttatttgaggtttgaaagt
gtggaagctgcatcacgtgcccaacaggcaatgcacaagagatggtttgctcgcagattg
atttcggccatattcttgcaaccttatgaatacgatgccaaattcaaaggtgctccctga
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