Salvia splendens (scarlet sage): 121787218
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Entry
121787218 CDS
T07627
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121787218
03036 Chromosome and associated proteins [BR:
sspl03036
]
121787218
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121787218
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121787218
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121787218
microRNA pathway
RISC loading complex
121787218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
121787218
NCBI-ProteinID:
XP_042041830
LinkDB
All DBs
Position
22:complement(198848..205412)
Genome browser
AA seq
1060 aa
AA seq
DB search
MARKRRTELPGGESSESQEAGSGHGGVQRSPTQHQPQSQQQQLQQQGGYQGAGRGLAPQR
GAYGGRGGGRTAPQQYYGGPPEYQQGQGRGGQQYSRGGAARRGAFVGGAEAPSAGGPSRP
PAPELHQATQSPYQAVMTTPSSYGASSSTQAPDPLQISEVTEHIQDLSIQQEVTPGQHMQ
PASSKSLRYPLRPGKGTYGSKCVVKANHFFAELPDKDLHQYDVSIIPDVTSRGVNRAVME
QLVKLYRESHLGRRLPAYDGRKSLYTAGPLPFDYKEFNITLLDEEDAPGGARREREFKVI
IKHASRADLHHLGMFLQGRRADAPQEALQVLDIVLRELPTARYSPVGRSFYSPDLGRRQP
LGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDVSARPLSDAD
RVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFQETYG
FVIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPKEREL
DILRTVSHNAYAADPYAKEFGIKISEKLAQVEARVLPAPWLKYHDSGREKDCLPQVGQWN
MMNKRMVNGGTVNSWICINFARNVQDGLAHSFCHELAQMCMTSGMAYNPQPVLPVLSGRP
DQVERVLKARFHDVMTKLQPHKKELDLLIVILPDNNGSLYGDLKRICETDLGIVSQCCLQ
KHVFKMSKQYLANVSLKINVKVGGRNTVLVDALSRRIPLVSDQPTIIFGADVTHPHPGED
SSPSIAAVVASQDWPEVTKYAGLVCAQSHRQEIIQDLYKTWNDPQRGTMHGGMIKELLIS
FRRATGQKPQRIIFYRDGVSEGQFYQVLFYELEAIRKACASLEPDYQPTVTFVVVQKRHH
TRLFANNHSDRNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWD
ENKFSADALQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSG
AVPGRGGGAGARTTRVPGVNAAVRPLPQLRENVKRVMFYC
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaagaggcgaaccgaacttcctggtggtgagagctcagagtctcaagaagct
ggctcaggacatggtggtgttcagcgctcacctactcaacatcaaccacaatcgcagcaa
caacagctacaacagcaagggggatatcaaggagcgggaaggggcttggcaccccaacgt
ggggcctatggtggccgtggtggcggcagaacagctcctcagcagtattatggtggacca
cctgagtatcaacagggtcagggccgtggtggtcagcagtatagccgaggtggtgcagca
cgcagaggtgcattcgtgggtggcgccgaagcaccttctgctggtggtccatctcgtcca
cctgctcccgagctgcaccaagctacacagtcaccatatcaagctgtgatgactacgcct
agttcttatggggcaagctcctctacacaggcacctgatcctctgcaaatttcagaagta
actgagcacatccaggatctctctatccagcaagaagtgactccaggccaacatatgcaa
ccggcttcaagcaaatctctgagatatccgctgaggccaggaaaagggacctatggctca
aagtgtgtggtgaaagccaaccacttctttgcagagcttccagacaaggacttgcatcaa
tatgacgtctcaattattcctgacgttacatcccgtggagttaatcgtgctgtgatggag
caattagtgaagttatatagggaatctcatcttggtaggaggcttcctgcctatgatgga
agaaagagcctgtacactgctggaccactacctttcgattataaagaattcaacataaca
cttctagatgaagaggatgctcctggtggtgcgaggcgagaaagagaatttaaggtgatc
atcaagcatgcttcacgggctgacttgcatcacctaggaatgtttttacaaggcagacga
gctgatgcgccacaagaggctcttcaagttctggacattgtacttcgtgaacttcccact
gctcggtattccccggttggccgttctttttattccccagatttaggcagaaggcaacct
cttggtgaaggacttgaaagttggcgtggattttaccagagtattcgtcctactcagatg
ggtctatcgctgaacattgatatgtcttccactgcgttcatcgagccactcccagttatt
gattttgttgcgcagcttctgaatagggatgtgtcagctagaccattatctgatgctgac
cgtgttaagatcaagaaagcacttagaggagtaaaggtggaggttactcatcgaggaaac
atgcgaaggaagtaccgtatctctggtttgacatcacaggcaactcgtgagctaacattt
ccggtggatgaaaggggtacaatgaaatctgtggtggaatacttccaagagacctatggg
tttgtcattcagcacacccaatggccttgtcttcaagtgggaaatacccagaggccaaac
tacttgcccatggaggtgtgcaagatagtggagggccagagatactccaagagattaaat
gagagacagataactgcactacttaaagtgacatgccagcgtcccaaggaaagagaatta
gacattcttcggactgttagccataatgcctatgctgctgacccttatgcgaaagagttt
ggaattaaaattagtgagaagttggcacaagttgaggctcgtgtccttcctgcaccatgg
ctcaagtatcatgattccggtagggagaaggactgtcttcctcaagttgggcagtggaat
atgatgaacaagaggatggttaatggtggcactgtcaacagttggatctgtatcaacttt
gcccggaatgttcaagatggtttggcacacagcttctgtcatgagcttgctcagatgtgc
atgacttctggcatggcatataatcctcagcctgtgttgccagtcctgagtggtcgccct
gatcaagtggaaagagttttgaaagctaggtttcatgatgtgatgactaaactgcagcca
cataagaaggagcttgacttgctaattgttatattacctgacaataatggctctctatat
ggtgatctaaagcgcatatgtgagacagatctgggtattgtatcacaatgttgcctgcag
aagcatgttttcaagatgagcaaacaatatcttgccaatgtttctctgaagataaatgtc
aaagttggtggtaggaacactgttcttgttgatgcactttccaggcgtataccccttgtg
agcgaccaacctacaattatttttggtgcggatgttacgcatccacaccctggcgaagat
tctagcccatcaattgctgctgttgtggcctctcaggattggcccgaggtcacaaaatat
gctggcttggtttgtgcacaaagccacagacaggagataattcaagatttgtacaaaacc
tggaatgacccacaaagggggactatgcacggtggcatgataaaggaactgcttatttca
ttccgcagagcaacaggacagaaacctcagcgtattatcttctacagggatggagtaagt
gagggacagttctatcaagttttgttttatgaacttgaggccatacgtaaggcatgtgcg
tctttggagccagactatcagccaactgttacctttgtggtggttcaaaaacgtcatcac
actcgtctgtttgctaataaccacagtgacaggaattcagttgacagaagtggcaatatt
ttgccaggtactgttgtagattcgaagatctgccatcccactgaattcgacttctacctt
tgcagtcatgctgggattcagggaactagccgtcctgctcattaccatgtcttgtgggat
gagaataagttttcagctgatgcccttcagtcacttactaataacctttgttacacatat
gcaagatgtacacgatctgtttcaattgtacctcctgcatactatgcacatttggctgct
ttccgtgctcgtttctacatggagcctgaaacctctgacagtgggtcgatgaccagtggg
gcagtccctggtcggggtggtggtgcgggtgcacggactactagggttccgggggtgaat
gctgctgtgaggccccttccacagctcagggagaatgttaaaagagttatgttctactgt
tga
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