Salvia splendens (scarlet sage): 121787300
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Entry
121787300 CDS
T07627
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121787300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121787300
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121787300
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
121787300
NCBI-ProteinID:
XP_042041919
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Position
22:7378283..7382518
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AA seq
575 aa
AA seq
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MDQDQKKLKESQFPCEVLEKVLSFIDSHKDRSSASLVCKDWYDAERWTRSNLFIGNCYSV
SPEIVARRFPKIKSVRLKGKPRFSDFNLLPQDWGANVHAWVVMFAKVYPTLEELRLKRMT
VSDESLDLLARSFPGFKALSLSSCDGFTDEGLKAIATHCRNLTELDITDSVTEDIGGGWL
SCFPESFVSLEILNFASLQCEVSFDALERLVSRCRALRVLQVNESINLEQLQWLLVKVPH
LTRLGTGSFMQELTVRQYEDLQTAFSNCKNLQALSGLWDATSVYLPFVYGACASLTFLNL
SEANLRSGELAKLLPHCTSLRRLWVIDTVGDKGLEAVGSSCPLLEELRVFPLDPYDLDNR
QGVTEAGFLAVSRGCPNLKYVLYFCRKMTNDAVATIVQNCPDFTHFRLCIMNPGEPDHLT
NEPMDEAFGAVTKTCTKLRRLSVSGLLTDKAFDYIGKFAKNLETLSVAFAGSSDRGMQCV
LEGCPKLRKLEIRDCLFGNAALLSGLDKYETMRSLWMSACNLTIKGCRLLAKEMPRLNVE
VIQDEWSDETHANKVYVYRSVAGPRRDAPPFVLTL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagatcagaagaaattgaaagaatcacaattcccatgtgaagttttggagaag
gtgttatcattcatagattcccacaaggataggagctcagcctcccttgtttgcaaagat
tggtatgatgctgagagatggacaagatccaatctttttatagggaattgctattcggtg
tctcccgagatcgtggctcgaaggtttcccaaaatcaagagtgttaggctcaaagggaag
ccaagattctcagattttaatttgctgccccaagattggggtgctaacgttcatgcttgg
gtggttatgtttgctaaggtttatccgacactcgaggagctgaggctcaagaggatgact
gtcagcgacgagagcttagatctcttggccaggtcattcccgggcttcaaggctttatcg
ttgtcaagttgcgatggtttcacagatgaaggtctcaaagcaattgcaactcactgcagg
aacttgactgagcttgatataacggatagtgtaacagaagatattggcggaggttggctg
agttgcttcccagagagcttcgtctcattagagatactaaattttgccagccttcagtgt
gaggtgagttttgatgccctcgagagacttgtcagccggtgcagagcgttaagggttctg
caggtcaacgaaagcatcaacttggagcagctgcaatggctccttgtgaaagttcctcat
ttaacaaggctcggcaccggctccttcatgcaagaacttacagtccgtcagtacgaggat
ctccaaactgcgttcagcaattgcaagaatctccaagctctttcgggtttatgggatgct
acttccgtatatctcccttttgtttatggagcttgtgcaagtctaactttcttgaatttg
agcgaagcgaatctccgaagtggcgaactagcaaagcttctccctcactgcactagtcta
cgtcgcctttgggtgattgacaccgttggagataaaggtcttgaggctgttgggtcgagc
tgtccgttgcttgaagaactcagagtcttcccccttgatccgtatgatctagataatcga
caaggggtgacggaggcgggcttcttggctgtttctcgtggctgcccgaacctcaaatac
gtcctctacttctgccggaagatgaccaatgacgctgtcgcaaccatagtgcagaattgc
cccgatttcacccatttccgtctctgcataatgaatccaggcgagccggatcacctaaca
aacgagcctatggacgaggccttcggcgccgtgaccaaaacatgcaccaagctccggaga
ctgtcagtgtcaggccttctcaccgacaaggctttcgactatatcggaaaattcgccaag
aatctcgagactctgtccgtggccttcgccggcagcagcgacaggggcatgcagtgcgtc
ctcgaaggctgcccgaagctgaggaagctcgagataagggattgcctgttcggaaacgct
gcgctgctatccggactggacaagtacgagacgatgcggtctttgtggatgtcggcttgt
aacttgaccataaaagggtgcaggctgcttgcaaaggagatgccgaggctcaatgtggag
gtcatccaagatgagtggagcgacgagacgcacgccaacaaagtctatgtgtatcggtcc
gtggctgggccgagacgggacgcacccccgttcgtcctcactctgtga
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