Salvia splendens (scarlet sage): 121787363
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Entry
121787363 CDS
T07627
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121787363
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121787363
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121787363
Protein phosphatases and associated proteins [BR:
sspl01009
]
HAD phosphatases
Fcp/Scp phosphatases
121787363
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121787363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Ebola-like_HR1-HR2
VID27
Motif
Other DBs
NCBI-GeneID:
121787363
NCBI-ProteinID:
XP_042042010
LinkDB
All DBs
Position
22:7306232..7313630
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AA seq
949 aa
AA seq
DB search
MYGKLVVVYEGERLLGGAELQPQEGFAALFKAEEIREIRVSHFSPPSERCPPLAVLHTVN
SAGICFKLESTAKNVDSSPLAVMHATCLRQNKTAVASIGREQIHLVAMHSRNYAQTPCFW
GFNVASSLYNSSLAMLNLRCLGIVFDLDETLIVANTLRSFEDRIESLQRKINGETDPHRI
ASMMAEIKRYQDDKYILKQYAESDQVIDNGKVIRSESEVVLALADNQQTIVRPLIRLQDK
NIVLTRINPLIRDTSVLVRLRPAWEDLKTYLIAKGRKRFEVFVCTMAEKDYALEMWRLLD
PGSNLINPREILDRIVCVKSGCKKSLFHVFQDGNCHPKMALVIDDRLKVWDEQDQQRVHV
VPAFTPYFSPQAEGNNTIPVLCVARNVACNVRGGFFKEFDDGIMQRISEVAYEDGIRDLP
SVPDVGSYLVSEDDPLASNGNKDSVGFDGMADAEVERRLKEAMLASSTAPNSVMNLDPRI
ASAVQFTTASTSFAVHPPTLQRPAMPLPSKQLPQLAKLFRTPSAGSGQVETTLHSSPARE
EGEVPESELDPDTRRRLLILQHGQDMREQPPNENQFPARPHGQAPLPRAHPQGWFPPEEE
MPLRQLKQVSPPLEFNAEALPIDNRARKSTFLHEVQTSFPPARIHENQRLPEEELPQQDH
LRLNGPLPDFRSISDEDSLVAQMSSAYKDLDLEAGQIDPSSATSAAVLQDIAFKSGTKVE
FKHALAPGTELQFFMEVFFAGQKIGEGIGRTRREAQCHAAEGSMFYLADKYLSQLNHDSS
NMPVSGISLGKLQDNYINDGVSSREATPSRTSVSPRILDPRFETSKKSTNSISALKELCM
MEGLSVAYQTQPQFSAHWGQKNEVYAEVEIDGQVLGKGTGLTWDEAKSKAAEKAIVAVKS
MFSQYPHKRQASPRSLQEMPSKRLKPESSRALHRMPSSARPPKNAPHIP
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaaactggtggtggtgtatgaaggggagagattgctgggaggggctgagttg
cagccgcaagagggcttcgctgcgttgtttaaggcggaggagattcgggagattcgcgtc
tcccatttctcgccgccgagtgagcgatgtccgccactcgccgtgctacacactgtaaac
tcagccggaatatgcttcaaattggaatctacggccaagaatgtggattcatcacctctt
gctgttatgcacgccacctgccttagacagaacaagacggcggtggcatctattgggaga
gagcagattcatttggttgccatgcattcaagaaactatgcacagaccccttgtttttgg
gggtttaatgtggcatcaagtctgtacaattcttcccttgctatgctaaatctcagatgc
cttggcattgtatttgatcttgatgaaacattgatagttgcaaatacattgcggtcgttt
gaggataggatagagtcactgcaacgaaaaataaatggcgagactgatccacatcgtatt
gctagcatgatggcagagattaaacgctatcaggatgataaatatattttgaagcaatat
gcagaaagtgatcaggtaatagacaatgggaaggtaatcaggtcagagtctgaggtggtt
ctcgctttggcagacaaccaacaaactattgttcgtccacttatccggctacaagataaa
aacattgttcttactcgcattaatcccctgatacgtgatacaagtgttcttgtgagatta
agacctgcatgggaggatcttaaaacctacttgattgctaaaggccgaaagcgctttgag
gtttttgtttgcactatggcagaaaaagactacgccttagaaatgtggagacttcttgat
ccaggatcgaatttgataaacccaagggagattttggaccgcattgtgtgtgtcaagtca
ggttgcaagaagtcattgttccacgtttttcaagatggaaactgccatcctaagatggcc
ttggtaattgatgaccgtctaaaagtgtgggatgagcaagatcaacagagagtgcatgtt
gttcctgcatttacaccctatttttctcctcaagctgaaggtaacaacacaatccctgtg
ctctgtgtggcaagaaatgtagcttgcaatgtcagaggtggtttttttaaagagtttgat
gatggcataatgcaaagaatttctgaagttgcatatgaagatggtatcagggacttgcct
tctgtacctgatgtgggcagctacttggtttctgaggatgatccattggcttctaatggc
aacaaggattcagttggttttgatggaatggcggatgctgaggtggaaaggagattgaag
gaggcaatgttagcttcttcaactgctcctaattctgtgatgaacttagaccccagaata
gcctcagctgtccagttcaccacagcttcaacgtcttttgcagttcatccaccaacttta
caacggcccgcaatgcctctgccaagtaagcaattacctcagctcgcaaaattgtttaga
acaccatcagctggatctgggcaagtcgaaactaccctgcacagttctcctgctagggaa
gaaggtgaggtaccagaatctgaattagatcctgacactaggaggagactgctcattttg
caacacggtcaagacatgagagaacagcctccaaatgaaaatcagtttcctgcgcggccg
catgggcaggcacccttaccaagagctcatccacaaggttggtttccccctgaagaggag
atgcccctgagacaattgaagcaggtttcaccacctctggagttcaatgctgaggctctt
ccaattgacaatcgggctcgtaagtcaacctttctccatgaagtgcaaacttccttcccg
cctgccaggattcatgagaaccagaggctgccggaggaggaactcccacaacaagaccat
ttaagactgaatggaccactgcctgattttcgttctatttctgatgaggatagtcttgtg
gctcaaatgtcttcagcatacaaagatcttgatcttgaagccggacaaattgatccatca
agtgcaacttctgctgcagttttacaggacattgctttcaagtctggaacaaaggtggag
ttcaagcatgctttagcaccagggacagaactgcagttctttatggaggttttctttgca
ggtcagaaaattggcgaaggaattggtagaactaggagggaagctcaatgtcatgctgca
gaaggatctatgttctatttggctgataaatacttgtcccagcttaatcatgattccagc
aacatgcctgtaagcgggattagtctgggtaaactgcaagacaattatatcaatgatggt
gtgagttcacgtgaggctacaccctcaagaacatcagtgtccccaagaattcttgacccg
agatttgagacctccaagaagtcaacaaactcaatatctgctcttaaagaattatgcatg
atggaaggccttagtgtagcatatcaaactcaacctcagttttcagctcattggggccag
aaaaatgaagtgtacgccgaggttgaaattgatgggcaagtattaggcaagggaactggt
ttaacatgggatgaagctaaatctaaggctgctgagaaagctattgttgctgtgaaatcc
atgttcagtcagtatcctcacaagcgccaggcttctccgagatctctgcaagagatgcca
agtaagaggctgaaaccagaatcctcaagagctctgcaccggatgccatcatccgcccgt
cccccaaagaatgctcctcatattccgtga
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