Salvia splendens (scarlet sage): 121787444
Help
Entry
121787444 CDS
T07627
Name
(RefSeq) vesicle transport v-SNARE 13-like isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121787444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121787444
Membrane trafficking [BR:
sspl04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
121787444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Pox_EPC_I2-L1
Uso1_p115_C
DUF3792
DUF668
Mt_ATP-synt_B
Peptidase_M2
ODV-E18
Fusion_gly
DUF5798
Motif
Other DBs
NCBI-GeneID:
121787444
NCBI-ProteinID:
XP_042042100
LinkDB
All DBs
Position
22:21477155..21483210
Genome browser
AA seq
221 aa
AA seq
DB search
MSQAFEGYERQYCELSANLSKKITSASLLDGEQKKQKVFEIQTRLGDAESLIRKMDLEAR
SLPPSVKAMLLAKLREYKNDLNNLKSEVKRITSANANQAARDELLESGLTDTMAVSADQR
ARLLMSTERLNKTGERVRESRKTMLETEELGVSILQDLHQQRQSLLHAHGTLHGVDDNIG
RSKKILTNMSRRMNRNKWMIGTVIAVLIIAILLVLYFKLIH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagcgttcgaaggttatgagcggcagtactgcgagctgtctgctaacctatcc
aaaaagattacttcagcaagtctccttgatggagaacaaaagaaacagaaagtatttgaa
atacagacacgattgggggatgctgagtcattgatacgtaaaatggatcttgaagctagg
agcttgccaccgagtgtgaaggccatgcttcttgccaaactaagagaatataaaaatgat
ttgaacaatttgaaatcagaagttaagagaatcacatcagctaatgccaatcaagctgca
agggatgagttgttggaatctggattgacagatacaatggcggtatcagctgatcaaaga
gcaaggctgttgatgtcaactgaaagactaaataagacaggcgaaagggtcagagaaagt
agaaaaacaatgctcgaaactgaggagcttggtgtctcaattcttcaagatctgcatcaa
caacgtcaatcacttctgcatgcacatggcactcttcacggggtggatgacaacataggc
cggagcaaaaagattctcaccaacatgtcaagaaggatgaacagaaataagtggatgatt
ggaacagttattgcagtcttgattattgcaattcttctcgttctttacttcaagctgatc
cattag
DBGET
integrated database retrieval system
