Salvia splendens (scarlet sage): 121787598
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Entry
121787598 CDS
T07627
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121787598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121787598
03009 Ribosome biogenesis [BR:
sspl03009
]
121787598
04131 Membrane trafficking [BR:
sspl04131
]
121787598
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121787598
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121787598
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
121787598
Membrane trafficking [BR:
sspl04131
]
SNARE
SNARE associated proteins
Others
121787598
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121787598
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121787598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
Viral_helicase1
AAA_18
Parvo_NS1
ATPase_2
ABC_tran
IstB_IS21
AAA_7
AAA_lid_PRS2_C
NACHT
NB-ARC
TsaE
AAA_24
DUF815
Zeta_toxin
Vps4_C
ResIII
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
121787598
NCBI-ProteinID:
XP_042042307
LinkDB
All DBs
Position
22:23765615..23769878
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AA seq
806 aa
AA seq
DB search
MSNQPGPSDPNAKKDFSTAILERKKAANRLVVDEAINDDNSVVSLHPDTMEKLQIFRGDT
ILIKGKKRKDTVCIALAEDSCEQPKIRMNKVVRNNLRVRLGDVVSVHLCPDVKYGKRVHI
LPVDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVVETDPSEYCVV
APDTEIFCEGDPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSWE
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAA
DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIF
KSCLRKSPVSKDVDLRALAKYTQGFSGADITEICQRAVKYAIRENIEKDIEREKRRSENP
EAMEEDIEDEYAEIKPAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGAEFRFAEQ
TGGSAAAAADPFAGGSGAADDDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcagccagggccatccgatcccaacgcgaagaaggacttcagcactgcgatt
ttggagaggaaaaaggcggcgaatcggttggtggtggatgaggccatcaacgatgacaat
tctgtagtttctcttcaccctgatactatggagaaactccagattttccgcggagacaca
attttgatcaagggtaagaaaagaaaagatactgtctgcatcgctcttgctgaggattcc
tgcgagcaaccaaagattcggatgaataaggttgtccggaacaatctcagagttagacta
ggagatgtcgtttccgtgcacttatgtcctgatgtgaagtatgggaagcgagtccatatt
ctccctgtggatgacaccattgaaggggttactggaaaccttttcgatgcttacctgaaa
ccatatttccttgagtcataccggcctgtgaggaagggtgatttgtttcttgtgagagga
ggaatgagaagcgtagagttcaaggtcgttgaaactgatccttcagaatactgtgttgtt
gcccctgatacggagatcttctgtgaaggagaccctgtaagaagggaggatgaggatagg
ttggatgaagttggttacgatgatgtgggtggtgttcgtaaacagatggctcagattcgt
gaattggtagagctgccgctgaggcacccacagctttttaagtcaatcggagtgaagcct
ccaaaaggaattctgctttatggtcctcctggatctgggaaaaccttgattgcccgagct
gtggccaacgagactggtgctttcttcttctgtattaatggaccagagataatgtcgaaa
atggcgggagaaagtgaaagtaacctcaggaaggcctttgaggaagctgagaagaacgcg
ccttctatcatatttattgatgaaatcgactccatagctcccaagagagagaaaacccat
ggagaagtagaaaggagaatcgtatcccaactcctgacattgatggatgggctcaaggct
cgtgctcacgttattgtgatgggtgctacaaaccgtcccaacagcattgaccctgctctt
agaaggtttgggaggtttgatagggaaatagacataggcgttcctgatgaagtagggcgc
ctcgaggtgcttcgtatacacacaaagaacatgaaacttgctgaagatgttgatttggag
agaatttccaaggatacacatggctatgttggtgccgatttagctgctttgtgcactgag
gctgcccttcaatgcattagggagaaaatggatgtgatagacttggaagacgactccatt
gatgctgagatactgaactccatggctgtcagcaatgagcacttccagactgctcttgga
acgagcaacccctctgctctacgtgagacggttgttgaagtgcccaatgtcagttgggaa
gacatcggaggccttgaaaatgtcaagcgcgagctccaagagacggttcaatatccggtt
gagcatcccgagaagtttgagaaatttggaatgtcgccctcgaagggagttcttttctat
ggtcctcctggatgtggaaaaactttgctggccaaggctatcgcgaacgagtgtcaggcg
aacttcatcagtgtcaaggggcctgaattgctcactatgtggttcggagagagtgaagcg
aatgtcagagagattttcgacaaggctcgccaatctgctccttgcgtcctatttttcgat
gagttggactccattgctactcagagaggaagcagtgtaggagatgctggtggcgctgcc
gatcgtgtgttgaatcaactcctaacagaaatggatggtatgaacgccaaaaagactgtc
ttcattattggtgccaccaacaggcctgacatcatcgatcccgccctcctccgcccgggc
cgtctcgatcaactcatctacatccctcttcccgatgaggaatcccgctatcaaatattc
aagtcgtgcttgagaaagtcgcccgtctccaaagacgtcgacctcagagccctcgccaag
tacacacaaggattcagcggcgccgacattaccgagatatgccaacgcgcggtcaagtat
gccatccgggaaaacatcgagaaggatatcgagagggagaagcgaaggagcgagaacccc
gaggccatggaggaagacatcgaggacgagtatgccgagatcaaacccgcacacttcgag
gaatcgatgaagtttgctcggaggagcgtgagtgacgccgacatacgcaagtaccaggcg
ttcgcacagaccctacaacagtcgaggggattcggcgcagaattccggtttgcagagcag
accgggggcagcgctgcggccgcagccgacccttttgcaggaggctctggtgcagctgat
gatgatgatctctacagttaa
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