KEGG   Salvia splendens (scarlet sage): 121788020
Entry
121788020         CDS       T07627                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03420  Nucleotide excision repair
sspl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121788020
  09124 Replication and repair
   03420 Nucleotide excision repair
    121788020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sspl04121]
    121788020
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121788020
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sspl04147]
    121788020
Ubiquitin system [BR:sspl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     121788020
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      121788020
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      121788020
Exosome [BR:sspl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121788020
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 121788020
NCBI-ProteinID: XP_042042805
LinkDB
Position
22:complement(5956776..5963269)
AA seq 825 aa
MSHPASTSTSNPSKRSSSSPHSAAASPILPAMKKAKSHNTPHVHFSDSPALSPMIEDDPT
DAALEASSPSSAFARAGTASAGGVTASAGGVTANLSRKKATLPQPTKKLVIKLNKAKPML
PVNFEENTWATLKSAISAIFLKQPNPCDLEKLYQAVNDLCLHKMGGSLYQRIERECETYI
SAALQSLVGQSEDLVVFLSLVQKQWQDFCDQMLMIRGIALYLDRTYVKQTTNVRSLWDMG
LQLFHKHLVLASEVERKTVFGLLKMIESERLGEAVDRTLLNHLLKMFTALGIYPDSFEKS
FLEGTSEFYAGEGVKYMQQADVPDYLKHVEMRLQEENERCLIYLDANTRKPLVATAERQL
LVRHVTAILDKGFMTLMDGKRIDDLRRMYMLFSRVDALESLRQSLNQYIRRTGQSIVMDE
EKDREMVSSLLEFKANLDRIWEESFSKNEAFSNTIKDAFEHLINIRQNWPAELIAKFVDE
KLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLSKSASIDAEKSM
ITKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWP
TYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLF
QTVVLMLFNDAQNLSFQDIKEATGIEDKELRRTLQSLACGKVRVLQKIPKGRDVDDDDSF
VFNDQFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTL
LITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgtctcaccccgcctccacctccacctccaaccccagcaaacgctcctcctcctccccc
cattccgccgccgcatctccaattctccccgcgatgaagaaggccaagtcccacaatact
ccccacgtccacttctccgactcccccgccctctccccgatgattgaggacgatcccacc
gacgccgcgctcgaggcctcctccccctccagcgccttcgcccgcgccggcaccgcctcc
gctggcggcgtcaccgcctccgccggcggcgtcaccgccaatttgtctaggaagaaggcc
acccttccgcagcccacgaagaagctcgtaattaagctcaataaagccaaaccgatgctg
cctgttaattttgaggaaaatacttgggcaacactcaagtcggctatcagtgccatattt
ttgaagcaacccaatccatgtgacttggagaaactctatcaggcggtgaatgacctttgc
ctgcacaaaatggggggaagtctctatcagcggatcgagagggagtgtgaaacctatata
tctgctgcccttcaatctttggttggccaaagtgaagatctggttgttttcttatcactt
gttcagaagcaatggcaggatttttgtgaccagatgctgatgatccggggtatagcatta
tatttagatagaacatacgtgaagcaaacaacgaacgttcgctcactgtgggacatgggc
ttgcagcttttccacaaacatcttgtcctagcttcagaagtggagcgtaaaaccgtattc
ggtcttctaaaaatgattgagagtgaaagactaggcgaagcagttgatagaactctcctt
aatcatctattaaaaatgtttactgcattgggtatctatccagatagcttcgaaaagtca
ttccttgaaggtacatctgagttttatgcaggcgaaggtgtcaaatacatgcagcaggca
gatgttccagattatttaaagcatgtagagatgaggttgcaagaagaaaacgaaagatgt
ctaatttatctcgatgcaaatacaagaaagccacttgtagcgactgcagaaaggcagctg
ctcgtgcgccatgtaactgccattctcgataagggtttcatgacacttatggatggcaag
cgcatcgatgaccttcggaggatgtatatgctcttttccagggttgatgctcttgaatca
ttgaggcaatccctgaatcagtatatccgaagaactggccagagtattgtcatggatgaa
gagaaggacagagagatggtgtcgagcttattggaatttaaggctaatcttgacagaata
tgggaagaaagcttctccaaaaatgaagcatttagcaacaccatcaaagatgcttttgag
catctcattaatatccggcagaattggcctgctgagctaattgccaaattcgttgatgag
aagcttcgtgctggaaacaagggtacctcagaagaggaattggagggtacacttgataaa
gtgttggtcttgttcagatttatccagggtaaggatgtatttgaagctttctacaagaaa
gatcttgctaaaaggctcttgttgagtaaaagtgcttctattgatgcagagaaatctatg
attactaagttgaaaactgagtgcggcagtcaatttaccaacaaactcgaaggaatgttc
aaggacatcgaattgtctaaagagattaacgaatcattcaagcaatcatctcaagctcgg
actaaactcccgtctgggattgagatgagcgttcatgtcttaaccactggttattggcct
acctatcctcccatggatgtacggctcccacacgagctcaatgtttaccaggacattttt
aaggagttttacttgagcaagtatagtgggaggcgattgatgtggcaaaactcgttaggc
cattgtgttcttaaagcagatttccctaagggtaaaaaggagctcgctgtttcgctgttt
cagactgttgtattgatgctgttcaatgatgcacaaaatctttcctttcaagatataaaa
gaagctacaggtatcgaggataaagagctgagaaggactttgcagtccctcgcttgtggg
aaggttcgcgtccttcaaaaaattcctaaaggcagagatgttgatgatgatgattccttt
gtcttcaacgatcaatttactgctcccctttatcgtataaaggttaacgcgattcagatg
aaggaaacagttgaggagaacacaagcaccacagaaagggttttccaagatcggcaatat
caggtcgatgctgctatcgttcgtataatgaagactagaaaagtgctgagccacacacta
ctgattactgaactctttcagcagctcaagtttccaataaaaccggctgacctgaagaag
aggattgagagcctcatcgaccgagagtacctggagcgtgacaaaaacaacccacaaata
tacaactaccttgcgtga

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