Salvia splendens (scarlet sage): 121788386
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Entry
121788386 CDS
T07627
Name
(RefSeq) protein STABILIZED1-like
KO
K12855
pre-mRNA-processing factor 6
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121788386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121788386
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
121788386
Complex C
U5 SnRNP specific factors
121788386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Suf
TPR_19
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_16
TPR_2
TPR_8
TPR_CcmH_CycH
TPR_17
FAT
ubiquitin
PMC2NT
DUF3444
Motif
Other DBs
NCBI-GeneID:
121788386
NCBI-ProteinID:
XP_042043004
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MVYVQSPFSKTLTVNLNPSTTTLRDLNLHLHRHHLIPISHQRLYLSPRLLSTEGNDAVFL
SDLGVSLNSTLTLHVPLLGGMQAPVAPKARTDFLNTKPPPNYVAGLGRGATGFTTRSDIG
PARAAPDLPDRSAAAIGAPGTPGVGRGRGKGAGEEEEEEEAEEKGYDENQKFDEFEGNDA
GLFASAEYDDEDKEADAVWEAIDNRMDSRRKDRREARLKEEIEKYRASNPKITEQFADLK
RKLYTLSTDEWDSIPEIGDYSQRNKKKRFESFVPVPDTLLEKARQEKEHVSALDPKSRAA
GGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSD
AEVSDINKARLLLKSVTQTNPKHPHGWIAAARLEEVAGKLQAAQNLIRKGCEECPKSEDV
WLEACRLASHVDAKAVIARGVKAIPNSVKLWIQAAKLELEDVNKSRVLRKGLEHIPDSVR
LWKAVVELANEEDARLLLQRAVECCPLHVELWLALARLETYDNAKKVLNKAREKLSKEPA
IWITAAKLEEANGNTSMVGKIIERGIRALQREGVEIDREMWMKEAEAAERAGSVATCQAI
IHNTVEVGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKAAQLEK
SHGTRESLDALLRKAVTYIPHAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIW
LAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIAEERRLLDEGLKQF
PSFFKLWLMLGQLEERLANLERAKDAYELGLKHCPKCIPLWLSLAHLEEKVNALSKARAV
LTMARKKNPQTPELWLAAVRAESRHGHKKEAEILMAKALQECPTSGILWAASIEMAPRPQ
QKTKSRDAYKKCGDDPHVLAAVGKIFWHDRKVDKARTWFNRAVTLAPDIGDIWALYYKFE
LQHGGEDNQRDVLNRCVTADPKHGEKWQGISKAVENSHQSTEFILKKVVVAIGKEDHAAE
NGKN
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggtgtatgtccaatcccccttcagcaaaaccctaaccgtcaatctcaatccttcaacc
accactctgcgggaccttaacctccatctccatcgccaccacctcatcccaatttcccac
cagcgcctctatctctcgccacgcctcctctccaccgaaggaaacgacgccgttttcctg
tccgatttgggggtttccctaaattcaaccctaaccctacacgtccctctcctcggcggt
atgcaagcgcccgtggctccaaaagccagaactgacttcctcaacacgaagccacctccg
aattacgtcgccgggctgggccgtggcgcaaccggtttcaccacccgatctgatatcggt
cctgcccgagctgcccctgacttgcctgacagatccgccgcggcgatcggcgcacctggg
acgcctggcgtgggccgcggccgggggaagggagctggcgaggaggaagaggaggaggag
gctgaggaaaagggatatgacgagaatcagaaattcgatgaattcgaagggaatgacgct
ggattgtttgcttctgcggagtacgacgatgaggataaagaagctgatgctgtttgggag
gcgattgataataggatggattcgcggaggaaagatagaagggaggcgaggttgaaggag
gagattgagaagtatcgagcctcgaatccgaagatcacagagcagtttgctgatttaaag
aggaaattgtacacattatcgaccgatgagtgggatagcataccagagatcggggattat
tctcagaggaacaagaagaagagattcgaaagtttcgttccggtaccagacacgctgtta
gagaaggcaaggcaggaaaaggagcatgtgagtgctttggatccgaagagcagggcggct
ggtgggactgaaacgccatgggcacagactccggttacagatttaactgctgtcggtgaa
gggagaggaactgtgttgtcattgaagctcgataggctgtctgattcagtctctggattg
actgtggtggatcctaaaggttacttaacagatttgaagagtatgaagatcactagtgat
gctgaggtgtctgatataaacaaggctcgattgctcctgaaatcagtaacgcagacgaat
ccgaaacaccctcatggctggattgccgcggctaggttagaagaggtggccgggaagctt
caggctgcacagaatttgattaggaaagggtgcgaagaatgccctaaaagcgaggatgtg
tggttggaggcgtgccgtttggcgtctcatgttgatgcgaaggctgtgattgcaagaggt
gtgaaggcgattcctaactcagtgaagttatggattcaagcagcgaagcttgagttggag
gatgtgaataagagtagagtgctgaggaaagggcttgagcatataccagactctgtgagg
ctttggaaggcggttgttgagcttgctaatgaggaagatgcgaggcttttgttgcagagg
gctgtggaatgctgcccgttgcatgttgagctatggttggcacttgctaggctagaaact
tacgataatgcaaagaaagtgctgaataaagcgagggagaagctttcgaaggagccggct
atatggatcactgctgccaagttggaagaagctaatgggaatacgagcatggttgggaag
attattgagaggggtattcgagctttgcagagggaaggtgttgagatcgacagagaaatg
tggatgaaagaggccgaggcagctgaaagagctggttctgttgctacctgtcaagctata
atccacaacacggtcgaggttggggtggaagaagaagataggaagagaacttgggttgct
gatgcagaggagtgcaagaagagaggctcgatagagacggcgagggccatctatgcccat
gctttaactgtgtttttaacaaagaagagcatatggctgaaggctgctcagcttgagaag
agccatggcactcgggaatctctcgatgctctactccggaaggctgttacttacatacca
catgctgaagttttatggctcatgggtgccaaggagaaatggcttgctggggatgtgcct
gcagctcgggcgattcttcaagaagcatatgctgcaattcccaactccgaagagatttgg
cttgctgcattcaagcttgagtttgagaatcatgagccagagagggcaaggatgcttctt
gcaaaagcacgagagaggggaggaacggagagagtatggatgaagtctgccattgttgag
agagaactggggaacattgcagaggagaggaggttgcttgatgaagggcttaagcaattt
ccttcgtttttcaagctctggttgatgctggggcagttggaggagcgtcttgcgaacttg
gaacgagccaaggatgcgtacgagcttgggttgaagcactgcccaaagtgtattcctcta
tggctctcacttgctcacttggaggagaaggtgaatgcattaagcaaagcccgcgctgtt
ctgacaatggctaggaagaaaaaccctcaaacgcccgagctttggcttgctgcagtgaga
gctgagtctcgacatggtcacaagaaggaagccgaaatattgatggcaaaggcgttgcaa
gaatgcccgactagtggtatcctctgggctgcttcaatagagatggctcctcggcctcaa
cagaagacaaagagcagggatgcgtacaagaaatgcggcgacgaccctcatgtcctcgct
gctgtggggaagatattttggcatgataggaaggttgacaaggctaggacatggtttaat
agggctgtgacacttgctccggatattggggatatctgggcgctgtactacaaattcgag
ctccagcatggtggggaggataaccagagggatgtgctgaacaggtgcgtcactgcagac
ccaaagcatggggagaagtggcaggggatatcgaaggcagtggagaattcccatcagtct
acggagtttatcttgaaaaaggtggtggttgctatagggaaagaagatcatgctgctgaa
aatggcaaaaactag
DBGET
integrated database retrieval system
