KEGG   Salvia splendens (scarlet sage): 121788475
Entry
121788475         CDS       T07627                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03082  ATP-dependent chromatin remodeling
sspl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    121788475
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121788475
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sspl01009]
    121788475
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sspl03021]
    121788475
   03036 Chromosome and associated proteins [BR:sspl03036]
    121788475
Protein phosphatases and associated proteins [BR:sspl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121788475
Transcription machinery [BR:sspl03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     121788475
    SWI/SNF complex
     121788475
Chromosome and associated proteins [BR:sspl03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    121788475
   PBAF complex
    121788475
   SWI/SNF complex
    121788475
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 121788475
NCBI-ProteinID: XP_042043071
LinkDB
Position
Unknown
AA seq 241 aa
MKSHSPWSTARNPVKFRIPTADNLVPIRLDIEIEGQKFRDAFIWNPSDPDSEVVVFAKRT
VKDLKLPPAFVTQIAQSIQTQLTEFRSYEGQDMYTGEKVVPIKLDLRVNSTLIKDHFLWD
LNNFESNPEEFAKTFCKDMGIEDPEVGPAIAIAIREQLYEIAVQNVTSARESRINKKGRR
GLEHSQASKNSGNAADLFKLFGSKSSVVRKRKEWDVYEPMIDLLSNEEVDALKAKEERNA
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaatcccactctccttggagcacagccagaaacccagtcaagttccggataccaaca
gcagataacctagtcccgatacgcctggacattgaaattgaaggccagaaatttagagat
gctttcatctggaacccttctgatcctgattctgaagtagtggtgtttgcaaaaagaaca
gtgaaagacttaaagctgcctcctgcttttgtcactcagattgctcaatccatacagaca
cagctaactgaatttcgctcctatgaagggcaagatatgtatactggcgagaaagttgtt
cctatcaagcttgatcttcgtgttaacagtactcttataaaagatcattttttatgggat
ttgaacaatttcgagagcaatcctgaagaatttgccaaaacattttgcaaagacatgggc
attgaagatcctgaagttggacccgcaattgcaattgccatacgagaacaactttatgag
attgctgtacaaaatgtgacttcagcccgtgaaagcagaataaacaagaaaggccgcagg
gggctcgaacatagccaggccagcaagaacagtgggaatgctgcggacttatttaagtta
tttggcagcaagtccagtgtagtcagaaagaggaaggagtgggatgtatatgaaccaatg
atcgatctcttatcaaacgaggaggtagacgcccttaaagctaaagaagaaagaaatgct
cgatga

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