Salvia splendens (scarlet sage): 121788480
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Entry
121788480 CDS
T07627
Name
(RefSeq) syndetin-like
KO
K23288
syndetin
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121788480
Membrane trafficking [BR:
sspl04131
]
Protein recycling
Others
EARP complex
121788480
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
121788480
NCBI-ProteinID:
XP_042043080
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Position
2:12196329..12208748
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AA seq
1119 aa
AA seq
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MHSGDNPPTLPFPLSPLQLLNAGAGDFGEGGFELSRYLFLGSLLFSRQAGGMDLSKVGEK
IYSSVRSARSIGLLPSTSDRPEVPVRAAAAAAVARILAGLPPHQRHNFSISDELSFMYGS
RPQGQAVDELEKEFYEEEFDPVRHILEQIPSEENEPAYFEEQAALRLAQLDKISESLSRH
VMEHHEQMVNGMNLVRELEKDLKIANVICMNGRRHLTSSRNEVSRDLIVTENSKKKQVLL
GMLPILSELRHAVDLQVALDTCLEERSFSKAFQVLPEYLQLLDSLSDLSAVQEMSLDVEV
WLGKTLQNLDSLLLEVCQDFKEDGYLTVIDAYALIGDVPGLAEKIQSFFMQEVLSESHSV
LKTILQEDVENPNPQITRLTYSDLCTQIPESKFRQCLQATLAVLFKLMCSYYKITNFKLE
DKVSSCHNPSGDEQGMLSGVSESTAKKVSSTFLAGEGSVTASTERGSRLSSVEVSSASVT
DTEGTHGPILNDHPTDGGRDDGSEASSSGSPWFLLRKDAVTFVSLALQRGCRNLWQLTTS
RISVLLSTSAASSTCIHQFLRNYEDLSIFVLAGEAFCGTEAIEFRQKVKSICEGYFVAFH
RQSIYVSLKMILERETWQILPPDTVHVVSFPGLVGDGAALLVSSVSSPRAKLLHDSKSFG
VASGSKKGGFSYWVENGKLFFPKVSGRSEEHSNSFQSNGSEHATKIPRQTKSSSDVDTNH
VNGTIPEEENEDLHADFIDEDSQLPSHITIPSHSRHSSLHWNNEDSMAQTGSSLSVLRSM
DKYARLMQKLEIVNVEFYKGICQLFEIFFYFVFETFCEHNTPTIAKRTNGSIPHKLKTAI
ARISQECDQWIKHQPVSTSSSSPASSNPSFTHMDVTPTSPPSHMNHSSFGLKERCAGADT
ISLVAQLLHRSKTHLQSMLPCKYGALVEDFYFHMVDAVPDLTQLIHRTTAKSLLHINGYA
DRIASAKWEVKELGMEHNGYVDLLLGEFKHYKTRIAHGGIRQEVQDLLLEYGVENVAETL
IEGLSRVKRCTDEGRALMSLDLQVLINGLKHFVSIDVKPKLQIVETFIKAYYLPETEYVH
WSRAHPEYSKSQIVGLINLVATMKGWKRKTRLEILEKIE
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgcactcgggcgacaatccaccgacacttccgtttccactaagtccattgcagctattg
aatgccggtgccggcgatttcggggagggaggtttcgaattgtcgcggtatttgttccta
ggatcgctgctcttctcgcgacaagcaggcggcatggacttgtcgaaagtcggggagaag
atctacagctcagttcgctccgcgcgctcgattggcctccttccttccacatccgatcgt
cccgaggttccagtacgagcagcagcagctgcagctgtggcccgtattcttgctggacta
cctccacatcaaagacataatttttcaatctccgatgaactgagtttcatgtatgggagt
agacctcaaggtcaagctgtagatgagctcgagaaggaattctatgaggaggagtttgat
cctgttagacacattttagagcaaatcccttccgaagaaaatgaaccagcatattttgag
gaacaggccgctcttcgattagcacaactggataaaatttccgagagcttgtcgcgccat
gtaatggaacatcatgaacaaatggtaaatgggatgaatctggtccgagagttggagaag
gacttgaagattgcaaatgttatctgcatgaatgggcgaagacaccttacctcttcaagg
aatgaggtatctagagatctaattgttacagaaaattcgaagaagaagcaagtgctactg
ggcatgcttcccatcttgtctgagcttcgtcatgcagtggacttgcaagtggctcttgat
acttgtcttgaggaaaggagtttctctaaggctttccaagtactgccagagtatttacaa
cttttagatagtttatcagacctttcggctgtgcaagagatgagccttgatgttgaggtt
tggttggggaagactcttcagaatttggattcacttctattagaagtgtgccaggacttc
aaagaggatggctatctcactgtgattgatgcatatgctttaattggtgatgttcctggt
ctagctgaaaaaatacagagcttcttcatgcaggaggttctctctgaaagtcactcagtc
ttgaagaccattctgcaagaggacgttgaaaatcccaatccccaaattactaggttgaca
tacagtgatttgtgcacccaaataccagagtcaaagtttaggcagtgtttacaagcaaca
ctagctgttctctttaagctgatgtgctcttactacaaaattaccaacttcaaacttgaa
gataaagtgtcatcatgccataacccaagtggtgatgaacaaggtatgctatctggggtc
tctgagagtactgccaaaaaagtttcttctacttttctggcaggagaaggctcagttact
gcatcaactgagagaggatctcgtttgtcatcagtggaagtaagttcggcatctgtaaca
gatactgaaggtacccatggccctatactcaacgatcatccaactgacgggggaagagat
gatggaagtgaagcatcaagtagcgggtctccatggttcttgctgcgcaaagatgctgtg
acgtttgtttcacttgccttacaaagaggatgtaggaacctctggcagcttaccacaagc
cgtatatcagttttgctttcaacttcagcagcttcttctacttgcattcatcaattctta
agaaactatgaagatctaagtatatttgttttggctggggaagctttttgtgggactgag
gctattgagtttcgccagaaggttaaatccatttgcgaaggctattttgttgcattccat
cgtcagagtatttacgtaagtctaaagatgatcctggaaagggaaacttggcagattttg
ccaccagacacagttcatgtagttagttttccaggactggtgggtgatggagcagctctc
cttgtttcatctgtcagttctccccgtgcaaaattgctacatgacagtaaatcatttgga
gtcgctagtgggtcaaagaagggtggattttcatattgggttgaaaatggcaagctgttt
tttccaaaagtgagtggcaggtctgaggagcattccaactccttccagtccaacggatca
gaacatgctactaagatacccaggcaaactaaatcttcctctgacgttgacacaaaccat
gttaatgggactatcccagaagaagaaaatgaggatctccatgcagattttattgacgaa
gatagtcagcttccgagtcacattaccatacccagtcattcaaggcatagctcgttacat
tggaacaatgaggattcgatggcacaaacaggatcctcccttagcgtcctgagatcgatg
gacaaatacgcacggttgatgcagaagttagagattgtcaatgttgagttttataaggga
atttgccaattgtttgagatctttttctactttgtgtttgagacattctgtgagcataat
actccgactattgctaaacgcaccaatggttctattcctcacaagttaaagactgcaata
gcaagaatttcacaagagtgtgaccagtggataaaacatcaaccagtatcaacatcttca
tcatccccagcatcttcaaatccatcattcacacatatggatgttacccctactagtcct
cccagtcacatgaatcattcgtctttcggactgaaggaaagatgtgctggggctgacact
atatctcttgttgctcaattattgcatagatccaaaacacatctgcagtcaatgcttcca
tgcaaatatggagcactagtggaggacttctattttcacatggttgatgctgtgcctgat
cttactcagctcattcatagaacaacggcaaaatcgctactgcatatcaatgggtatgct
gatcgcattgccagtgctaaatgggaggtgaaagagcttggaatggagcataatgggtat
gttgatttattactgggtgaatttaagcactacaaaacaaggattgctcatgggggtatc
cggcaagaggttcaagacctcctcctagaatatggagttgaaaatgttgcggaaactctt
atcgagggcctatctagggtgaagaggtgtactgatgaaggacgggcactcatgtcgctg
gatcttcaggttctaataaatggcctaaaacattttgtctcaatcgatgtaaagccaaaa
ttgcagatagtagaaacttttatcaaggcatactaccttccagaaaccgaatatgtccac
tggtcgcgtgctcatccggaatatagtaaaagtcaaatagtggggcttatcaatctagtg
gcaaccatgaaaggttggaaaagaaaaaccaggttggagatcttagagaagatagaatga
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