Salvia splendens (scarlet sage): 121788587
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Entry
121788587 CDS
T07627
Name
(RefSeq) uncharacterized protein LOC121788587
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121788587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121788587
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121788587
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121788587
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121788587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
121788587
NCBI-ProteinID:
XP_042043168
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MNPQFNPHLHNPNNQIQLNGANAPAQHQVMMNQGNLGQINPQFRPGMLNNAQPPMPPFNN
PNPFFGQNQFIPFPQGAFHNLNANNLPQPFAQNAVNPAQFMPNWPMNVPNLVQNVTQLLQ
MQMMNGAPQNLGLFMNAQAAAGSNNVALSQPVGGNSLPSMNHNNAPTKGIGAHHAQRNWD
VFAPGAANPQSDAGVVSDANDRKNNWRKPREKNITGNLKHNKSQRGFGNKQFHPRQNAQG
NFNFNNENRGKGNKNFAGKNFNASSHSEQTQMGKKRPLMLNYTEQEIKHWHEERKKNYPS
QANTEKKLKKNPKQPEVEDETAKIRRQQLKEILAKQAELGCEVAEIPSCYLSDPEQQAGG
NRQNNKPFGKRDRFQNKFDKKGRFQKGGRFSKRQRYENGHSTDLQNQTGCTTNPPHNESK
KEPSLLKKLLSSEIKKDKKHLLQVFRFMVVNNFFKNWPEKPLEFPKVIVKESGNESEILK
PETDMIEDGEYVGETTITS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaatccccagttcaatcctcacctccacaacccaaacaatcaaattcagctcaatgga
gctaatgctccagctcaacatcaggttatgatgaaccaaggtaatttagggcaaattaac
cctcaatttcggccgggaatgctcaataacgctcagccgccaatgccgccgtttaataac
ccaaatccctttttcggtcaaaaccaatttatccccttcccacagggcgctttccacaac
ctaaatgcgaacaatttgcctcagccgttcgctcagaatgccgtcaaccctgctcagttc
atgcccaattggccaatgaatgtgccgaatttagtgcagaatgtcacgcagcttttgcaa
atgcaaatgatgaatggtgcccctcaaaatttgggtcttttcatgaacgctcaagcggca
gcaggaagtaacaatgtggccttgtcgcagcccgttggtgggaatagtttacccagtatg
aaccataataatgccccaaccaaaggtatcggtgctcatcacgcacaacgaaattgggat
gtctttgctcctggtgctgcaaatccgcagagtgatgctggagtagttagtgatgcgaat
gacagaaagaataactggagaaaacctcgtgaaaagaacatcactgggaacctcaaacat
aacaaatcacagagaggatttggcaacaagcaatttcatcctcgccaaaatgcacaaggg
aacttcaacttcaataatgaaaatcgaggaaaaggtaacaaaaattttgcagggaagaac
tttaacgcatccagtcattctgagcaaactcaaatgggaaaaaagaggcctctcatgtta
aattatacagaacaagaaattaaacattggcatgaagagcgcaagaaaaactacccatca
caagccaacacggagaagaagttgaaaaagaatcccaaacagcctgaggttgaagatgaa
accgcaaagataagacgacagcaactgaaagaaatattggcaaaacaagctgaattaggc
tgtgaagtggcagaaataccatcttgttacctatcggatcccgagcaacaggcaggtggt
aacagacaaaataataagccatttgggaagagagacagatttcaaaacaagtttgacaag
aagggaagattccagaagggtggccgcttctccaagagacaaagatatgaaaacggtcat
tccacagatttgcaaaaccaaactgggtgcacgaccaaccccccgcacaatgagagtaaa
aaggagccatctctgttgaagaaactactaagctctgagatcaagaaagataagaaacat
ctgctgcaggttttcaggttcatggttgtgaataacttcttcaagaattggcccgaaaaa
cctctggaattccccaaagttattgtcaaagaatctggcaatgaaagcgagattttaaaa
ccggaaacggacatgattgaagatggtgaatatgtaggtgaaaccaccataacaagttga
DBGET
integrated database retrieval system
