Salvia splendens (scarlet sage): 121788842
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Entry
121788842 CDS
T07627
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121788842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121788842
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121788842
mRNA degradation factors
5'-3' decay
Decapping complex
121788842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
121788842
NCBI-ProteinID:
XP_042043378
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All DBs
Position
2:13121003..13124887
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AA seq
372 aa
AA seq
DB search
MEPETMSQNGKLMPNLDEKTTKVLNLTVLQRIDPFVEEILITAAHVTFYEFNIDISQWSR
KDVEGSLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNASQEVNGI
WFYNARECEEVANLFSRILNAYSKVPTKSKVSSVKSEFEELEAVPTLAVMDGPLETTSSI
ANATEVSDDPSFMNFFSNALNIGAAPHTTMSGQPFNPSATVIPASHPQIVSLPTLTTAQP
PSNLSASTPKMSILENTERTTAQRSADLVKPSTFFGPPPSSAGLALPPVSSAIPTAPPLN
TPGNLQRPYGAPLLQPFPPPTPPPSLTPTAPTPIYGPPISREKVRDALQLLVQDNQFIDM
VYRAMLSANQQS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgaaacgatgtcgcagaacgggaaattgatgcccaatctcgacgagaagacc
accaaagtcctcaatcttacggtgctgcagcggatcgatccattcgtggaggagattctc
atcaccgctgcccacgtcaccttctacgaattcaacatcgacattagccaatggagtcga
aaggatgtggaaggctcactttttgtcgtcaaaaggaatacccaaccaaggttccagttt
atagtaatgaaccgccgaaatactgataatctggtggagaatctattgggagattttgag
tatgaagtccaggttccatatctcttataccgaaatgcttcccaagaagttaatgggata
tggttttacaatgcccgggaatgtgaagaggttgcaaatctatttagcaggatacttaat
gcatattctaaggtgcctacaaagtccaaagtctcttctgtgaaaagtgaatttgaagaa
ctagaagcagttcctacactggcagtaatggatggtcccctagagacaacatcttccatt
gctaatgcaacagaggtttctgatgatccttcttttatgaacttcttcagtaatgctttg
aacataggagctgctccgcatacaacaatgtctggacagcctttcaacccctctgcaact
gttattcctgcatcccatccacagattgtttctctgccaactttgacaactgctcaacca
ccatctaatttatctgcttctacccctaaaatgtccattcttgaaaacacagaacgtacc
acagcacagcgttcagctgatcttgtgaaaccatcgactttttttgggcctcctccttcc
tctgctggactggctttaccacccgtatcatcagcaattccaactgcacctccattaaat
actccaggaaatctacagagaccatatggtgcaccattacttcagccatttccgccacca
acacccccaccatcactcactccaactgctcctacaccaatttatgggccacctatcagc
agagaaaaagttcgggatgcacttcaattgcttgttcaggacaatcaattcatcgacatg
gtttaccgagcaatgcttagtgcaaaccaacaatcgtga
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