Salvia splendens (scarlet sage): 121789692
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Entry
121789692 CDS
T07627
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121789692
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121789692
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
PsaS
Motif
Other DBs
NCBI-GeneID:
121789692
NCBI-ProteinID:
XP_042044016
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MPIFFKTFALSIFLLLAIATPAASRSENATENDPAAVAAMVDMTIRNRTESRKLESLSCG
TGNPIDDCWRCDPNWIRNRRRLADCAIGFGHKAVGGRDGRYYVVTDPSDEDVMNPRPGTL
RYAVIQDRPLWIVFKRDMVITLKHELLINSFKTIDGRGADVHIANGACLTIRGVTNVIVH
GLSIHDCKPTGNAMVRTSPSSYGYRTMADGDAISIYASSHVWIDHNSLAKCADGLVDATM
GSTAITISNNHFSHHNEVMLLGHSDSYMGDKGMQVTVAYNHFGEGLIQRMPRCRHGYFHV
VNNDYTSWEMYAIGGSANPTINSQGNRFLASNNPFAKEVTKRIVNDETWKSWNWKSEGDR
LLNGAYFTASGKREASSYARASSLAAKPSSLVATLTSDAGALHCRKGVRC
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgccgattttcttcaaaacatttgctctctctatatttctgctgctcgccattgcaact
cccgctgcatcaagatcagaaaatgcaactgaaaatgatcccgcagctgtagctgccatg
gttgatatgactattcgaaaccgaacagaatcgaggaagttggagtccttatcatgtggg
acaggaaaccccatcgacgactgttggcggtgcgaccccaactggatccgcaatcgccgc
cgtctggctgactgcgcgatcggcttcggccacaaggccgtcgggggccgggacggccgc
tactacgtggtgactgacccgagcgacgaggacgtgatgaacccgcgcccaggcaccctc
aggtatgccgtgatccaggaccggcccctgtggatcgtgttcaagcgcgacatggtgatc
acgctcaaacacgagctcctcatcaacagcttcaagaccatcgacggccgcggggccgac
gtccacatcgccaacggcgcatgcctcaccatccggggcgtcaccaatgtgatcgtccac
ggcctcagcatccacgactgcaagcccaccgggaacgccatggtccggacctcgccctcc
agctacgggtaccggaccatggcggacggagatgcgatatcgatctacgcatcgagccac
gtgtggatcgaccataactcgctggccaaatgcgccgacgggctcgtcgatgcaaccatg
ggatcaaccgcgattactatttccaacaatcacttctctcaccacaatgaagttatgttg
ttaggacacagtgactcatacatgggagacaaggggatgcaagtaactgtggcatacaat
cattttggggagggcctaatccaaaggatgccaaggtgcaggcatgggtattttcatgtg
gtaaacaatgactacacttcatgggagatgtatgctattggtggtagtgcgaatcccacc
atcaacagccaaggcaacagattccttgcctccaacaacccttttgctaaagaggtaacg
aagagaatagtgaatgatgagacgtggaagagctggaactggaaatcggagggtgatcgt
ctgctaaatggcgcgtatttcacagcgtcggggaaacgggaagcaagcagctacgctagg
gcttcgagccttgcagccaagccttcttcgttggtagcaacactcaccagtgatgctggg
gcgctacactgccgcaaaggtgtccgctgctga
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