Salvia splendens (scarlet sage): 121789994
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Entry
121789994 CDS
T07627
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121789994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121789994
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121789994
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121789994
NCBI-ProteinID:
XP_042044238
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MSRSSRTLYVGNLPGDVREREVEDIFYKYGPIVHIDLKIPPRPPGYAFVEFEESRDAEDA
IRGRDGYDFDGHRLRVELAHGGRGNSSLTDRRTESRGPRGGVSRRSDYRVLVTSLPHSAS
WQDLKDHMRRAGDVCFSQVFHEGSGKTGIVDYTNSDDMKYAIKKLDGSEFRNAFSRARVH
VKEYDSSRSRSRSRSRSPPYSKGRSNGRSKSKSPSVSRSRSRSKSPKGKSSRRSRSRSRS
VSRSRSGSKAHSLSRSPSRSRSPKPAKHTSASPKKRGLSRSLSRSKSPSQSRSRSHSR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgatctagcagaactctctatgttggcaatctccccggggacgttcgtgagcgt
gaagtggaggatattttttacaagtatggaccaattgtgcatattgatcttaaaatcccc
ccaaggcctcccggctatgcttttgttgagtttgaagagtctcgggatgctgaagatgcc
atacgagggcgtgatggctatgatttcgatgggcatcgcttaagggttgagctagcacat
ggcgggcgcggaaactcatcattgactgatcgtcgtactgaaagtcgtggtccccgtgga
ggagtttctcggcgctcagactacagagttttagtcaccagcttgcctcattctgcttca
tggcaagatcttaaggatcatatgcgtcgagctggagatgtctgcttctcacaagttttc
cacgagggtagtggaaagacagggatagtagactacacaaattctgatgacatgaaatat
gctatcaagaagctcgatggttctgagtttcggaatgccttctcacgggctagagtacat
gtcaaggaatatgattccagccgcagccgcagtcgcagtcgtagtcgcagcccgccttac
tcaaaaggcaggagcaatggtcgaagcaagagcaaaagtccaagtgttagccgaagcagg
agcagaagcaagtcgcctaaagggaaatcatcacgccgttcaaggtctcggtcaagatct
gtatctcgctctcgttctggatcaaaagcgcactctttgtcaagatctccttcaagatcc
agatccccgaaaccagctaaacatacgagtgcgagtccaaaaaaacgtggtttaagcaga
agccttagccgtagcaagagcccaagccagagccgaagcaggagccattccaggtga
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