Salvia splendens (scarlet sage): 121790478
Help
Entry
121790478 CDS
T07627
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121790478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121790478
03041 Spliceosome [BR:
sspl03041
]
121790478
03032 DNA replication proteins [BR:
sspl03032
]
121790478
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
121790478
Spliceosome [BR:
sspl03041
]
Complex A
U1 snRNP components
Sm proteins
121790478
U2 snRNP components
121790478
Complex B
U1 snRNP components
121790478
U4/U6.U5 tri-snRNP components
121790478
Complex C
U2 snRNP components
121790478
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121790478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
121790478
NCBI-ProteinID:
XP_042044613
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGFLVSVDSYMNLQLANAEEYIDGQCTGSL
GEILIRCNNVLYLRGVPEDEEIEDADRD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtgccagttaaccccaagcctttcttgaacaatttgactgggaagcctgtc
atggtcaaactcaaatggggaatggaatacaaaggtttcctcgtctctgtggattcatac
atgaacttgcagcttgcgaatgctgaggaatacattgatgggcagtgcactggaagcctt
ggagaaatcttgatcagatgcaataatgttctgtatctccgcggtgtgcctgaggatgaa
gagatcgaagatgctgaccgtgattag
DBGET
integrated database retrieval system
