Salvia splendens (scarlet sage): 121790505
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Entry
121790505 CDS
T07627
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121790505
Membrane trafficking [BR:
sspl04131
]
Autophagy
Other autophagy associated proteins
Others
121790505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR19_1st
BCAS3_WD40
Beta-prop_HPS5
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT140_2nd
Beta-prop_IFT122_1st
EIF3I
DUF7099
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
121790505
NCBI-ProteinID:
XP_042044636
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MATISSIATHPNPNPNLNLISPMLQPYLEQQQERLHPETPPDDGGSSYDAAPDTDDRDPS
AASANNNNPAALSPNPNPTPIKLLHLSFNQDYGCFATGTDRGFRIFNCDPFREIFRRDFD
GNGGGVGAVEMLFRCNILALVGGGEAPQYPLNKVMIWDDHQSRCIGELSFRSEVRGVRLR
RDRIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQVAGSFVLVCPGLQKGQVRVE
HYASKRTKFINAHDSRIACFTLSQDGNLLATASTKGTLVRIYNTHDGSLLQEVRRGADRA
EIYSVAFSPTAQWLAVSSDKGTVHVFSLKVNSGNVGSERSNSPPDTNPSATTPGSSLSFM
KGVLPKYFSSEWSVAQFRLPEGYQYIVAFGHQKNTVVILGLDGSFYRCKFEPGSGGEMTQ
LEYHNFLKPEEAF
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggctacaatttcaagcatcgccactcacccaaaccctaaccctaacctcaatctcatc
tcccccatgctccagccttacctcgagcagcagcaggagcgcctccaccccgagacgccg
ccggacgacggaggatcctcctacgacgccgctcccgacaccgacgaccgcgatccctca
gccgcctccgccaacaataataaccccgccgccctcagccccaatccaaaccctaccccg
atcaagctcctccacctctccttcaaccaggactacggctgcttcgccaccggcaccgat
cgtggcttccgaattttcaattgcgaccccttccgcgagatcttccggcgcgatttcgat
ggcaacggcgggggagttggcgcagtcgagatgcttttccggtgcaatatccttgcgctg
gtcggcggtggcgaggcgccgcagtatccgttgaataaggtcatgatttgggacgaccac
cagagcaggtgtatcggggagctgtccttcaggtctgaagtgcgcggggttcggcttcgg
agggatcgaattattgttgttctcgagcagaagatttttgtgtacaatttcgcggatttg
aagctgttgcatcaaattgagactattgcgaaccccaagggactctgcgcggtgtcgcag
gttgcaggatcgtttgtgctggtttgtccagggctgcagaaggggcaggtcagggtggaa
cattacgcttcaaagaggactaaattcatcaatgctcatgattccagaattgcgtgcttt
accctctctcaagatgggaatttgctggctactgctagcaccaaggggacgcttgttagg
atatataacacacacgacgggagtttgctgcaggaggtccgaaggggtgcagacagggca
gaaatatatagtgtggcattctcacccacagctcaatggttggcagtgtcaagtgataag
ggcactgttcacgttttcagccttaaggtcaattctgggaatgtcggcagcgagaggtca
aacagccctcctgatacaaacccttctgctacgacaccaggctcttcactgtctttcatg
aaaggagtccttccgaaatatttcagctcagaatggtcagtggctcagtttcgcttacct
gaaggatatcaatatattgttgcttttggacaccagaagaatacagtggtaattcttggc
ttggatggaagcttctaccgttgcaaattcgagccagggagtggcggagagatgacacag
ttggagtatcacaattttctgaagccagaagaagcattttag
DBGET
integrated database retrieval system
