Salvia splendens (scarlet sage): 121790562
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Entry
121790562 CDS
T07627
Name
(RefSeq) LOW QUALITY PROTEIN: BRCT domain-containing protein At4g02110-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121790562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121790562
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121790562
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
121790562
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
121790562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
121790562
NCBI-ProteinID:
XP_042044687
LinkDB
All DBs
Position
Unknown
AA seq
1342 aa
AA seq
DB search
MLASKQISAYNDPSKAFVGIRFVLFGFDSVIEDEVRAKLLEGGAVDTVNYGPDCNHVIVD
NLLYDDPICAAARRDGKILVIGKWVDHCFDGGMLVDPTSVMYWPVRDPSGIPAAKSLVMC
LTGYLRQDRDDVMNMVALMGATFTKPLLATKVTHLICYKFEGEKYELAKKMKTIKLVNHH
WLEDSLKAWKLLPEADYAKSGFELMMEALAKDSEEETEDMASVDLKKKSIISPHSALVEN
RNFQSPEQQGGSRTSGYVTACESFANVGNTSKTNSTPRKVNTGKTQSIPRKEADFENASL
SRDTHCEDIDTSNTSCARSPAKMFYGVPSNVRNGTTNSENIEHVIASASGSARKSVNDGL
SKLSTKSMKASLPLRSERIESISGSPLSTASKTGLCGGFDISMERDLDETDSHGIRSTLK
GSFLLPNEGKTVGSHRTNNPTVPRGSPRSPVLSHSPKTLIRSGLATKPTEMPVSRSSVDG
SCRIPCDMSPLKGALSHLDEEQTGGLPRTKKMTISRSGSKSRRLSRSPTTRSGCLREEVG
TTKQFVWYEEDERSTQWFKINKANPVFKILMGSGLDAKPMEMLVSGSSVHGTHQVGADVS
PTNVTSCMREEVGGVLNMLSERDGDTTESGLIKTPLEGVSVHPNKEQTSSLPGRKKSTVS
RSKSKSTKLSRSQETLVGTVLDTKATEILVSGTPIHGSRQSAVDISPPTYSRGRPKKRRL
PDSDVKDLSASRNKSCTREEDIHQSDPPDVRPPFPGSSSTVEKLDDHTDLNSSKVDNSGT
KSKSPKKKMLARKSLGSKPTSCKEKTSKYKGLLSAVLQSKSAGHLNGAVAVEHTKNASLA
EKFDTVSSNRNADVPVGDETEAPECKGPNEFDTGSKNSAEVEEHHTSKQSSKRTTQKKEA
KSRVKKSTEAKKLAELPESTSRGDVAENKITEGKKRPFAISKMNKLKGPTEEAKQDKKKT
VSKKGEMVVSAGKTSKRPSKKLKGSHDVEKENKPVMQPIVSCDTGAASDSTHKSKKPLKD
GSKVDKVNTKDLPTKAEPAWFILSGHRLQRKEFQQVIKRLKGKVCRDSHNWSYQATHFIV
PDLIRRTEKFFAAAASGSWILKTDYLTASTEAGRLLPEEPYEWQKKCLTEDGSINLEAPR
KWRLLRERTVHGAFYGMRIVIYGECIAPPLDTLKHVIKAGDGTILATSPPYTRFLNSRVD
FAIVSGGMPRVDMWVQEFLRHEIPCILADYLVCKRGYSLDKHVQYQTHAWAKRSLENLVN
RVEAVEDHPKTPEEHRVDDTVCQGCGSRDRGDEMLICGDESGTHGCGVGTHMDCXEEDWF
CRDCCHKTSSRSSKKRAKKSKK
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaagcaagcaaatttcagcatacaatgatccctccaaagcatttgtcggaatt
cgattcgttctcttcgggttcgattcagttatagaagacgaggtgcgggcgaagctttta
gaaggaggggcagttgatactgtgaattatggtccagattgtaatcacgtgatcgtcgat
aatcttctttatgatgatcccatatgtgctgctgcgcgaagagatggcaagatattggtg
attggaaaatgggtagatcactgttttgatggggggatgcttgttgatcctacttctgtc
atgtattggccagtaagagatccgagtgggattccagccgctaagtccctggttatgtgc
ctgactggatatctaagacaggatcgagatgatgtcatgaatatggttgccttgatgggt
gccacttttacaaagccattgctggctaccaaggttactcatctgatatgttacaagttt
gagggggagaaatatgagcttgccaagaagatgaagacgataaagctagttaaccatcat
tggctagaagatagtctgaaggcctggaagctacttccagaagctgattatgctaaaagt
gggtttgagttgatgatggaggctctagctaaagattccgaagaagagacagaagacatg
gcctcagttgatctgaagaagaaaagcatcatcagtcctcacagtgcactagttgagaat
agaaatttccagtcacctgaacagcaggggggttcaagaaccagtggttatgtgactgca
tgtgaaagttttgcaaatgttggaaataccagcaaaaccaactcaactcctagaaaagtg
aataccggcaaaacccagtcaattcccagaaaagaggccgactttgaaaatgcatcatta
tctcgtgatactcattgtgaggatatcgatacttcaaacacttcttgtgccagaagtcct
gctaaaatgttctacggggtgccatcaaatgtacgcaatggcacaacaaactctgaaaac
attgagcatgtgatagcttcagcatctggaagtgctaggaaatctgtgaatgatggattg
tccaaattaagtaccaagagtatgaaggccagtctccctctgaggtctgaaagaattgaa
agtatttcaggcagccctttgtcaactgcaagtaaaactgggctttgtggaggttttgac
atatcaatggagagagatctggatgagacagattctcatggtatcagatcaacattgaag
ggaagcttcttgctccctaatgaggggaaaactgttggatcacaccgtacaaacaaccca
actgttccccgtggtagtccgagatcaccagttttaagccattccccaaaaacattaatc
agaagtggattggctacaaaaccgacagaaatgccggtttctagatcttcagttgatggt
tcatgccgaataccctgtgatatgtctccgttgaagggagctttgtcgcaccttgatgag
gaacaaaccggcggtttgcctcgtacgaagaaaatgactatttcacgtagtggttcaaaa
tcaagaaggctaagccgttctccaactacccgatctggctgtttgagagaagaagttgga
acaaccaagcagtttgtctggtacgaagaagatgaacgttccacgcagtggttcaaaatc
aacaaagcgaacccggtcttcaagatattaatgggaagtggattggatgcaaaaccaatg
gaaatgctggtttctggatcttcagttcatggtacacatcaagtaggtgctgatgtttcc
cccacaaacgttactagttgtatgcgggaagaagttggtggtgttcttaacatgctgtct
gagagggatggagatacaactgaatctggtttgataaagactcctttggagggagtctca
gtgcaccctaacaaggaacagacgagcagtttgcctggtaggaagaaatcgactgtttcg
cgcagtaagtccaaatcaacaaaactaagccgttctcaggagacattagtggggactgta
ttggatacaaaagctacagaaatactggtttctggaacaccgatccatggttcacgtcag
tcagctgttgatatatctcctcccacatattctagaggaagacccaaaaagcggagattg
cctgattctgatgtgaaggacctttctgcgagcaggaacaaatcttgcactagggaagaa
gatatacatcaaagtgatccaccggatgttagacctccatttccgggttcaagctctacg
gtagagaaactggatgatcacacggatttgaactcttcaaaggtagataatagtggcacc
aagtcaaaatcccctaagaaaaagatgcttgccaggaagtcattgggttccaaaccaact
tcatgtaaagagaaaacttcaaaatataaagggctgctttctgccgtgttgcagagtaag
tccgcaggtcatttgaatggagcagtagctgttgagcacacaaaaaatgcttctcttgct
gagaaatttgacaccgtctcttcaaaccgcaatgcagatgtacctgtaggcgatgaaact
gaagctccagaatgcaaagggccaaatgagtttgacacggggagcaagaattctgcagaa
gtcgaagaacatcatacaagcaagcaatccagcaaaagaaccacacaaaagaaggaagca
aaatcaagggtaaagaagagcactgaagctaaaaagttggcagagttgccagaatcaaca
tcaagaggtgatgttgcagagaataaaataacagagggcaagaaacgtccttttgctata
tccaagatgaataaattgaagggtcctaccgaggaggccaaacaagacaagaagaagact
gtctcaaagaaaggagaaatggttgtgtcagctggtaaaaccagtaaaagaccatctaag
aaactaaaaggttcacatgatgtggagaaggaaaataaacctgttatgcagccaatcgta
agctgtgatacaggagcagcttcagattctactcataaatccaaaaagcctctaaaagat
ggcagtaaagtcgacaaggtcaataccaaggacctacccaccaaggccgaacctgcatgg
tttatattgagcggccataggcttcaaagaaaggagtttcagcaggttataaagcgatta
aaaggaaaagtgtgcagggactctcataattggtcatatcaagcaacacatttcattgtt
ccagatctaattcgaagaactgagaagttctttgcagctgcagcatctggaagttggatt
ctcaaaactgattatctaactgctagcaccgaggctggaaggcttttgcctgaagagccg
tatgaatggcaaaagaaatgcttgacggaagatggatcaatcaacttagaagctccgcgg
aaatggcgtcttctgagggagagaaccgttcatggagcgttttatggaatgcgtatagtc
atatatggcgagtgcattgctcctccactggatactttgaagcacgttataaaggctgga
gatgggaccatactagcaacctctcctccatacacgcggtttctaaattcaagggttgat
ttcgccattgttagcggagggatgccccgtgttgacatgtgggtgcaagagtttctcaga
cacgagataccctgcattctagccgactatctggtgtgcaagcgaggctattccctcgat
aagcacgtgcagtatcagactcatgcttgggctaagagatcactcgagaatctagttaac
cgtgtggaggctgtcgaggaccaccctaaaacaccggaagagcaccgcgtcgatgataca
gtgtgtcaagggtgtggatcgcgtgacagaggagacgagatgctcatatgtggtgatgaa
agtggtacccatggatgcggtgtaggtacccacatggactgcncagaggaagactggttc
tgccgtgactgctgccataaaactagcagccggagttccaagaaacgagccaagaaatcg
aagaagtga
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