KEGG   Salvia splendens (scarlet sage): 121791744
Entry
121791744         CDS       T07627                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03030  DNA replication
sspl03410  Base excision repair
sspl03420  Nucleotide excision repair
sspl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121791744
   03410 Base excision repair
    121791744
   03420 Nucleotide excision repair
    121791744
   03430 Mismatch repair
    121791744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sspl03032]
    121791744
   03036 Chromosome and associated proteins [BR:sspl03036]
    121791744
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121791744
DNA replication proteins [BR:sspl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    121791744
  DNA Replication Termination Factors
   ELG1-RFC complex
    121791744
Chromosome and associated proteins [BR:sspl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    121791744
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     121791744
  Check point factors
   HRAD17(Rad24)-RFC complex
    121791744
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 DUF815 Mg_chelatase AAA_22 AAA_5 RuvB_N ABC_tran RsgA_GTPase AAA_16 AAA_29 AAA_2 AAA_24 AAA_23 nSTAND3 T2SSE TsaE
Other DBs
NCBI-GeneID: 121791744
NCBI-ProteinID: XP_042045530
LinkDB
Position
2:22313247..22314682
AA seq 354 aa
MLWVDKYRPKTLDKVLVHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG
PGADKVKVENKAWRVDAGSRAIDVELTTVSSTHHVELNPSDAGFQDRYVVQEIIKEMAKN
RPIDVKGRKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVSEAIRSR
CLNMRINAPTEGEIMKVLEFIGKKESLQLPPGFADRIAHQSNRSLRRAILLFETCRVQQY
PFTSNQAIPPMDWEEYVSEIASSIFKEQSPKRLFEVRGKLYELLVNCIPPEIILKRLLYE
LLKKLDSELKHEISHWAAYYEHRLRLGQKAIFHLEAFVAKFMSIYKGFLIETFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtggataaatatcgtcccaaaaccctagacaaggttctggtccacgaagat
attgcccaaaatctgaagaaactggtgactgagcaggattgtcctcatctcctattctat
gggccatccgggtcgggtaaaaaaacccttatcatggcccttctcagacaaatctttggc
cccggagctgacaaggttaaagtggaaaacaaagcttggagagttgatgctgggtcgaga
gcaattgatgtagagcttacaacagtatcaagcacacaccatgttgaactgaatcccagc
gatgcgggatttcaggaccggtatgtggttcaagagattattaaggaaatggcaaagaac
cgaccaattgacgtcaagggaaggaagggtttcaaagttctagtgttgaatgaggttgac
aaactctcaagggaagcccagcactctctgcgaagaacgatggagaaatatagtgcatct
tgccgcctaattctctgctgtaatagctcttccaaggtctctgaagccatccgctctcgt
tgtctgaacatgcgtataaatgcaccgacggaaggagagatcatgaaggtgttggaattt
attggcaagaaggaatcattgcaacttcctcctggatttgctgaccggatagcacatcaa
tctaatcgaagcctgaggagggcaatactgttatttgagacttgtcgtgtccaacagtat
ccttttacatccaaccaagctataccacctatggattgggaggaatatgtttctgaaata
gcatcaagcatatttaaggagcagagtcctaaaaggttgtttgaggtccgtggaaagcta
tatgagttacttgttaattgtatccctccagaaatcattttaaagagattgctttatgaa
ctgctgaagaaattggactctgagctcaagcatgagatctctcattgggcagcttattat
gaacataggttgcgtcttggacagaaagcaatatttcaccttgaagcatttgtagccaag
ttcatgagcatctacaagggtttcctcatcgagacattcggctga

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