KEGG   Salvia splendens (scarlet sage): 121792037
Entry
121792037         CDS       T07627                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121792037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sspl03019]
    121792037
   03041 Spliceosome [BR:sspl03041]
    121792037
Messenger RNA biogenesis [BR:sspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121792037
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121792037
Spliceosome [BR:sspl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    121792037
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM Cut8
Other DBs
NCBI-GeneID: 121792037
NCBI-ProteinID: XP_042045751
LinkDB
Position
2:complement(24505588..24509201)
AA seq 431 aa
MARKRKQEPEDIAGEGEGQAEFEEEDEQVVEEPEEHKEEVIPETNQSGEDPSANTVTHNS
ADMEAEEQLDEEPFENLLEPFSKDQLTLLIKEAIAKHPDLAEIVFAMADSDPAHCKIFVH
GLGWDANVDSITSVFGKYGEIEDCKVVRDKNTGKSKGYGFILFKRRDGARCALKEPQKLI
EGRMTSCQLASAGPVQTPAQYAPAIVALPPASEYTQRKIYVSNVSAELEPKKLHDYFSKF
GEIEEGPLGLDKQTGKPRGFCLFVYKSSESAKKALEEPHKQFEGQMLHCQKAIDGPKHSK
GHFNIQQQGHHHHQAKRGRFAGHTGGHLMAPSAGPAGGFNPAVAPAAIGQAVAALLATQG
AGLGIGNLLGGIGNPQGVPPMMNNAGFGGQGAGGGYGGQPGMQGSYGGQPHMGQGGVRPR
QGGAPYMGHGH
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggctcgaaaacggaaacaggagcccgaagacatagcaggagagggagaaggacaagca
gaattcgaagaagaagacgaacaagtcgtcgaagagccggaggagcacaaggaagaggtt
attccagagacgaaccaatccggcgaggatccctccgcgaataccgtcactcacaattcc
gccgacatggaagccgaagaacaacttgacgaagagcccttcgagaatcttctcgagccc
ttctccaaggaccagctcactctcctaatcaaggaagccatcgcgaaacacccagatcta
gccgagattgtgttcgccatggccgattccgaccccgcccactgcaaaatcttcgtccac
ggcctcggctgggatgccaacgtcgattcaattacgtctgtttttggcaagtacggcgaa
attgaagattgcaaggtcgtcagagataagaacaccgggaaatcgaagggctacggcttc
attctcttcaagcggcgcgacggggctcgttgcgccctgaaggagcctcagaagttgatt
gagggaaggatgaccagttgccagctggcctcggctggcccggtgcagacacccgcgcag
tatgctccggcaattgttgctttaccacctgcttcggagtacacgcagaggaagatttat
gtgagcaatgtgtctgcggagcttgagccgaagaagcttcacgactacttttcgaaattc
ggggagattgaggaagggcctttggggttggataagcagactggaaagcctagggggttc
tgtttgtttgtgtataagagtagtgagagtgcgaaaaaggcgctggaggagccgcacaag
cagttcgagggtcagatgctgcattgccagaaggcgatagacggcccgaaacacagcaag
ggtcactttaacattcagcaacaggggcatcatcatcaccaggctaagaggggaaggttt
gctggacacactggtggtcacttgatggctccgagcgctggaccagctggagggtttaat
ccggcagttgccccggctgcgataggacaggctgtggcagctctgttggccactcagggg
gctggattgggtattgggaatttgctcggggggattggaaatccacaaggagtgccgcct
atgatgaacaatgcaggttttggaggtcagggtgctggtggcggctatggaggtcaacca
ggtatgcagggaagttatggtggccagccacatatgggtcagggtggtgtaaggccacgt
cagggtggggcaccctacatgggtcatggtcactag

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