Salvia splendens (scarlet sage): 121792062
Help
Entry
121792062 CDS
T07627
Name
(RefSeq) calcium-binding protein CAST-like
KO
K13448
calcium-binding protein CML
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
121792062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_9
EF_EFCAB10_C
AIF-1
EF-hand_14
EH
SPARC_Ca_bdg
PhageMin_Tail
Motif
Other DBs
NCBI-GeneID:
121792062
NCBI-ProteinID:
XP_042045786
LinkDB
All DBs
Position
2:26428502..26456313
Genome browser
AA seq
185 aa
AA seq
DB search
MENDDAQCKAGEGGRSFRLRSPSLNSVRLRRIFDIFDKNNDSVITVDELGQALALLGLQT
DQAQLDSMVQSYVQPGNTGLSFDDFQALHRSLDDAFFGLADEAAEVDDKQEEYDLTEAFK
VFDEDGDGYISAQELQVVLSKLGLQEGTELDRVEMMISSVDKNHDGLVDFLEFKDMMRSV
IVPSS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgacgacgcgcagtgcaaggcaggcgagggcgggcggtcgttccgcctccgc
agcccgagcctgaactcggtgcggctgcggcgcatcttcgacatcttcgacaagaacaac
gacagcgtgatcaccgtggacgagctgggccaggccctggcactcctgggcctgcagaca
gaccaggcccagctcgactccatggtccagagctacgtccagcctggcaacacgggcctc
tcctttgatgacttccaggccctccaccgctcgctcgacgacgccttcttcgggctggcg
gacgaggcggccgaggtcgacgataagcaggaggagtacgacctcaccgaggccttcaag
gtttttgatgaggacggagatggatacatctctgcccaggagctgcaggtcgtgcttagc
aagctcggcctgcaggagggcacggagctcgaccgggtcgagatgatgatctcgtccgtc
gataagaaccacgacgggctggtcgatttcttagagtttaaggatatgatgcgcagcgtc
attgtcccttcatcctag
DBGET
integrated database retrieval system
