Salvia splendens (scarlet sage): 121792106
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Entry
121792106 CDS
T07627
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121792106
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121792106
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121792106
Protein phosphatases and associated proteins [BR:
sspl01009
]
HAD phosphatases
Fcp/Scp phosphatases
121792106
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121792106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
NIF
dsrm
Motif
Other DBs
NCBI-GeneID:
121792106
NCBI-ProteinID:
XP_042045847
LinkDB
All DBs
Position
2:28700485..28706225
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AA seq
778 aa
AA seq
DB search
MSRLGFTSVVYHGDVYLGELEAVILKAGNFQFPNNEIRIHHITPNSDRCHPLSVLQTISY
ASVVCKLEPCADANPNPDEPSPLINLHASCFYELKTAVVLVGSEEIHLVAMPSMQKKFPC
FWCYSVPCGLYDACLWMLNTRCLAIVFDLDETLVVANTMKSFEDRIDALVGWIARETDPI
RESGMTAEMKRYVEDRALLKQYAEIDSVVDGGKVYRVQHEEVPILSDGIRRVVRPVVRLP
EKNIVLTRINPENRDTSVLVRLRPAWEDLKTYLTAKGRKRFEVYVCTMAERDYALEMWRL
LDPEAHLISSKQLLDRVVCVKSGARKSLLNVFQNGNCHPKMAMVIDDRLKVWEDKDQPRV
HVVPAFTPYYAPQAEIANAVPVLCVARNVACNVRGGFFKEFDENVLTRISEIFYENELIN
LPCAPDVSNFLISEDANLIPNGNSNGPVADGMNGPEVAQRLHPLDEKNGTHAASLSFANN
LELKSESSKIPVVSSIANAVGPVTRALPSEKPSLLGDPFRRDSRFPISTEPPLLSRFPWQ
APILQPQGVRIVEDDNSGGNFSNQTPGIFSEYDRGLQNSFSHGTSSSVPLELSHVNPMKA
EEANSVSDSQKQGPLLPNQFADYTKSNNQTSTTGKELKSEGDKMNLLPSFSISVLQEIGR
RCRSKVEFRPVVGTGNDLHFSVEVFFTGEKIGVGMGKTRKDAQQQAADNALRSLADNYAS
YIAPHCTTVDSDFDRPILEKENGFLWDTAKPGPEELPVSNGYLKQNNDKEKYDNGSHG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgattagggtttacatcagtggtttatcatggagatgtgtatctaggggaactg
gaagcagttattttgaaggccgggaatttccaattccccaataatgagattcgaattcat
cacatcacgcctaacagcgacagatgtcatcccctctctgttctacagacgatttcctat
gcctctgtagtctgcaaacttgagccctgcgctgatgccaatccgaatcccgatgagccg
tctcctctcatcaatctccacgcttcatgcttctacgaactcaagacggcggttgtgttg
gttggtagtgaggaaattcatttagtggcaatgcctagcatgcagaagaagtttccatgt
ttttggtgctactcagtgccgtgtggtttgtatgatgcttgcttgtggatgttgaatacc
cgatgtttagccattgtgttcgatctagacgaaactcttgttgttgccaacactatgaag
tcgtttgaggatagaatcgatgctttggtgggttggattgcgcgtgagacggaccctatt
cgggaatctgggatgacagcggagatgaagagatatgttgaggatcgtgcattgctcaag
cagtatgcagagattgacagcgttgtggatggtgggaaagtgtatagggtgcaacatgag
gaagtccctattctatcagatgggattcgtcgtgttgttcggcctgtagtaaggttgcct
gagaaaaatattgttcttacacgcattaatcctgagaaccgtgataccagtgtgctggtc
aggttacgacctgcttgggaagatttaaaaacttatctaactgcaaaaggccggaaaaga
tttgaagtctatgtttgcactatggctgagagagattatgccctggaaatgtggcggctg
cttgatccagaagcacacttaattagctcaaagcagctactggaccgtgttgtatgtgtc
aaatcaggtgctaggaaatctttgctcaatgtcttccagaatggcaattgtcatccaaag
atggcgatggttatagatgaccggttgaaagtgtgggaagacaaggatcagcctcgtgtc
catgtagttcctgcattcactccatattatgctccacaagcagagattgcaaatgctgtt
cctgtcctttgtgtagcaaggaatgtagcatgcaatgttagaggtggttttttcaaggag
tttgatgaaaatgtcttgacaagaatatctgaaattttctacgaaaatgagcttatcaac
ttaccctgtgcaccagatgtgagcaactttttgatttcagaggatgctaatcttatacca
aatgggaattctaatggtccagtcgctgatggaatgaatggacctgaagttgcacaaaga
ttgcatcctctggatgagaagaatggcacccatgctgcttccctttcctttgctaataac
cttgagttgaagtctgaaagctctaagattcctgtagtatcttctattgccaatgctgtt
ggtccagttaccagggctttaccttctgaaaaacccagtttgcttggcgatccatttaga
agagatagcaggtttccaatttcaactgaaccacctctattgtctagatttccttggcag
gcaccaatcctgcagccacaaggtgttcggatagttgaagatgataatagtggagggaat
tttagcaaccagactccaggaatattttcagaatatgatcgagggcttcagaactcattc
agtcatggtacttcatcatcagttcctctggaactttcgcatgtaaatccaatgaaagct
gaagaggctaactcagtctctgacagccagaaacagggccccttgttaccaaatcagttt
gcagattatactaaatcaaacaatcaaacttcaaccactggtaaagagcttaaaagtgaa
ggtgataaaatgaacctgttgccatctttttctataagcgtgcttcaagagattggaaga
agatgtagatcaaaggttgaattcagacctgttgtaggtaccggaaatgatttgcacttc
tcagttgaggtattcttcactggtgaaaaaattggtgttggaatgggaaagacgagaaaa
gatgcacagcaacaagctgcagacaatgctcttcggagcttagctgataattatgcttct
tatattgcacctcactgtaccactgtggatagtgattttgatcgacccattttagaaaag
gaaaatgggtttctttgggacactgccaagcctggacctgaagaactgccagttagtaat
ggatatttgaaacaaaataatgacaaggagaaatatgacaatggatcccatggctga
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