Salvia splendens (scarlet sage): 121792205
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Entry
121792205 CDS
T07627
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121792205
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121792205
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121792205
NCBI-ProteinID:
XP_042045998
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Position
2:31827270..31829799
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AA seq
503 aa
AA seq
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MPLQHERIALPTPMFLHCARFYQTRSCRFSAMLTVSCIVFLLLVSSFPQRASAMYNLTLP
GQHPNPDHVAQDLHRKVNGSIWRREMLSKEAGSSCMTGNPIDDCWRCDPNWQLNRQRLAD
CGIGFGQYALGGKGGRYYVVTDSSDHDPVTPRPGTLRYAVIQTEPLWIVFASNMLIQLSE
ELIFNSYKTLDGRGANVHIIGGGCLTLQYISNVIIHNVHIHHCYQSGETNIRSSPTHYGW
RGKSDGDGISVFGARDIWIDHCSMSHCKDGLIDVVMGSTGVTISNNHFSHHNEVMLLGHS
DDYLPDSGMQVTIAFNHFGKKLIQRMPRCRRGYIHVVNNDFTRWEMYAIGGSGNPTINSQ
GNRYIAPYDRNAKEVTKRVDTAEGDWRGWNWRSEGDIMANGAYFVASGQGVEVKYEKAYS
IEPKSAAYIDQITFNAGVLGSRRNNMGKWTAGNNTSGGDLDANSGIFGDYEDDYSGSWRP
CSAHSILKTFLTALSLFLFLSFK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcagcatgagcgcattgctctaccaacaccaatgtttctccactgcgccaga
ttttaccaaaccagaagctgcagattctcggcgatgctcaccgtaagctgcattgtgttt
ctcctccttgtttcctcttttccccagcgtgcctccgcaatgtacaacctcactctcccc
ggccagcaccccaaccctgaccacgttgctcaagaccttcacaggaaagtgaatggctct
atttggagacgagaaatgttatccaaggaggcggggtcgtcgtgtatgacgggcaacccc
atcgacgactgctggcgatgcgacccgaactggcagctgaaccggcagcgcctggcggac
tgcggcatcgggttcgggcagtacgccctgggcgggaagggcgggcgctactacgtggtg
acggactcgtccgaccacgacccggtgacccctcggccgggcacgctgcggtacgcggtg
atccagacggagcccctgtggatcgtgttcgcgtccaacatgctgatccagctctccgag
gagctcatcttcaactcctacaagaccctggacgggcgcggcgccaacgtccacatcatc
ggcggcggatgcctcaccctccagtacatcagcaacgtcatcatccacaacgtccacatc
caccactgctaccagtccggggagaccaacatacgctccagcccaacgcactacggctgg
cgcgggaaatcggacggcgacgggatctcggtgttcggggcaagggacatctggatcgac
cactgctcgatgtcgcactgcaaggacggcctgatcgacgtggtgatggggtccacgggg
gtcaccatttcgaacaaccacttctcgcaccacaacgaggtgatgctgcttggccacagc
gatgactacttgccagactccgggatgcaggtcaccatcgctttcaaccactttgggaag
aagttgatacagaggatgccgcggtgcaggagaggctacattcatgtcgtgaataacgat
ttcacgaggtgggagatgtatgccatcggaggcagtgggaatcccaccattaacagccag
gggaatcgttacatcgccccctatgatcgcaatgctaaggaggtgacgaagcgcgtggat
acggctgagggggactggaggggttggaattggagaagtgaaggtgatataatggcgaat
ggtgcctactttgtggcttcagggcagggtgtggaggtcaagtatgagaaggcctacagt
atagaacccaaatctgccgcatatattgaccaaatcactttcaatgctggtgtgctcggc
tccaggcgcaacaatatgggcaagtggacagccggaaacaatacttctggaggtgatcta
gatgcgaattcaggcatattcggggactacgaagatgattattccgggagctggaggcct
tgctctgctcattctattctcaaaacttttctaacagccttatcactatttctgtttcta
agcttcaaatga
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