Salvia splendens (scarlet sage): 121792213
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Entry
121792213 CDS
T07627
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121792213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121792213
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121792213
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
HECT type E3
121792213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
121792213
NCBI-ProteinID:
XP_042046006
LinkDB
All DBs
Position
2:complement(32605547..32613261)
Genome browser
AA seq
1538 aa
AA seq
DB search
MASRGQKRNEEVDELPADKRACNSLEFRPSSSNSSALMLTSTAHEAQDADMDTSSSTSGS
TRSEGDGEKELADGSCDSDNSIHDYYRNRSLSDQSKFKTVLLGLSEEVEESGQLAQLTEL
CELLSFCSDSSLSSPMVDSFSPLLVRLARHESNPDIMLLAIRAITYLCDVHPRSSIFIVR
HDAVPVLCQHLMAIEYLDVAEQCLQALEKISREQPVACLQSGAMMAVLGYIDFFSTSVQR
VALSTVVNICKKLSSESPPLFMEAVPILCNLLQYEDRQLVESVATSLIKIGEQASRSTTS
THMLDDICKHGLVEHTLHLIGLNSRTTLSQPTYIGLIGLLIKLATGSTVAFRTLFELNIS
TIVKDMLSTYDLAHGMQSTSLVDGHQSQINEVLKLLNELLPTITAEVDNQQKTDKEAFLS
KHPDILHKFGVDLLPILIQVVSSGVNLFICYGCLSVINKLVHFSSSDALRSLLQTANFSS
FLAGVFARKEHHVVLLALQIVDTITLKLPHVYLNSFIKEGVLFAIYGLLSPDKHSNISPI
SDGIASRAVQRCPCFAFDTCQSSESPENRTCTLQNDTVQNLAKYIWATYFETESVNPEKG
VTDILQKLRTLSTALTTLLNKSVEDATSSQQEEDIFNLLHKIISELNEKDSISTFEFVES
GIIKAFVCYLTNAINLFKREYVEKYSYIAEKRFEVIGRLLLTSADPARKESPLLSIVQRL
QIALSSVEGFPVISSHTYKRRNSYATIPYGHCTSYPCLKVQFVKGSLETCLQDYVEDVVN
VDPFVPLDEIEGYLLPRVKTRKTKNLKMESDDLKEKGGSCSHSPSDSTSSQIKRAEMLVD
VLKAQEGNPNLVFSSPAETSSSPEKALDSADTVNVQTVHEEEEHNDLQDGGVSNMDDVHT
SSNLLFYLEGQLLNRKLTLYQSILEQQTEAGQNNILSASLWSRTHKVTYRRDMTEKPSYS
KHSHDEALSSFLCRRTSFFHSPYFACIFSSEEDLGKSGPTYDILSLLKRMEGINRLRFYL
MYRARVSEFAEGGIDNFDKLILSVDEVPQNEFVNKKLTEKLEQQMRDPMAVSAGAMPAWC
SQLIAWCPFLFSFEARCKYFYLVALGRLPHQAHSDSHDDVRGSSGRQQNHGSLPRKKILV
HRNNILESASQMMELHARQKVLLEVVYSEEVGTGLGPTLEFYTLVCREFQGSGLGMWRDD
HVPLHSRTSSEAENSGYLVAPYGLVPCPWSPSLTAANSTTYSEVIRKFSLLGQIVAKALQ
DGRVLDLPFSKAFYKIILGKELDLYDIQTFDPALGRTLLEFLALIERNKYLTSHPEENVH
DFDLRLRSTKIEDLCLDFTLPRYPDYALNSESQSKMVGFCMVNLYNLEEYVTLIVDATVK
SGISRQVEAFKLGFDQVFPIKHLKVFTEEELERLLCGEHVLWNSDELLEHIKFDHGYTIS
SSPIVNLLEIMLEFDLEQQRAFVQFVTGAPRLPNGGLASLNPKLTIVRKHCSKEINADLP
SVMTCANYLKLPPYSSKEVMKEKLLYAITEGQGSFHLS
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggctagtcgaggtcaaaaaagaaatgaagaagtggatgaattgccagcagataagcgt
gcgtgcaattcattggagttccgaccaagttcttccaattcatctgctctaatgctgacg
agtactgctcatgaagcccaggatgctgacatggatacgtcgtcctcaacttctggatca
actagatcagagggtgacggtgagaaggaactcgcagatggctcttgtgattcagataat
agcatccatgactactataggaatcgatcattgagtgatcaaagcaagtttaagacagtt
ctgttaggtttgagtgaggaggttgaggaatcagggcagttggctcaactcacagagtta
tgtgagttgctgtccttttgtagtgatagttctttgtcaagtccgatggtggactctttt
tcacctctgcttgttagattggcaaggcatgagagcaatccagatataatgcttctggct
ataagagccataacttatttgtgcgacgttcatccccgatcctcaatttttattgtgaga
cacgatgctgttccagtcctttgtcaacatttaatggccattgaatacttggatgtggca
gaacaatgcttgcaagcattagagaaaatatcacgcgaacagccagttgcttgcttacaa
tctggcgctatgatggctgttttaggttatattgactttttctcgactagcgtacagagg
gttgcactgtctactgtggtaaatatatgtaagaaactgtcttctgaatctccaccactt
ttcatggaggcagttcctattttgtgcaatcttctccagtatgaagatagacagcttgtt
gagagtgttgcgactagcttaattaaaattggggagcaagcttctcgttctacaacttct
actcatatgctggatgacatctgtaagcatggattggttgagcataccttgcatcttata
gggttaaatagtcgaacaaccctatcccaaccaacatacattggcttgatagggttactc
atcaagttggctactggatctactgttgcttttaggacactttttgagctcaacataagc
accattgtcaaggatatgctatctacctatgatcttgcacatggaatgcagtctacctct
ctggtggatgggcatcagagccagataaatgaagttttaaaattattgaatgagcttctc
ccaacaattactgctgaagtggacaatcaacagaagacagataaagaagcttttctttca
aagcatcctgatattctgcataagtttggagttgatttactccctatcttaattcaggtg
gtcagttctggtgtgaatctgtttatatgttacggctgtctttctgttatcaataagtta
gttcatttcagctcatctgacgcgcttcgtagtttgctacaaactgccaacttttcaagt
tttttggctggagtgtttgcaagaaaagagcaccatgtggtattattagcccttcagatt
gttgatactataacgctcaagcttccacacgtatacttgaattcctttataaaggaaggt
gttctttttgctatatatgggctactctctccagataaacattcgaacatctctcctatt
tctgatggtatagcttcaagagccgtgcaaagatgcccgtgttttgcatttgatacatgc
cagtcttcagagtcaccagaaaacaggacatgcacgcttcagaatgatactgttcagaat
ctagcaaagtatatatgggccacttactttgaaactgaatcggtgaaccctgagaaagga
gtaactgatattcttcagaagctcagaacattatccactgcgttaacaactctattaaac
aagtcagtggaggatgcgacatctagtcagcaggaagaagacattttcaatctattgcac
aaaataatctcagagcttaatgaaaaagattctatctccacatttgagtttgtggagagt
ggaattataaaagcatttgtttgttacctaacaaatgctatcaatctttttaaaagagaa
tatgtggaaaagtactcatatattgcggaaaaaagatttgaggttattggacgactatta
ttgactagtgctgacccagctcggaaggaatctccactgttaagcatagtacagagatta
caaattgctctttcttcagttgaaggtttccctgtcatctcaagccatacatataagcga
aggaactcttatgccactattccatatgggcattgtacttcttatccatgtctgaaagtg
cagtttgtgaagggaagtctggaaacctgtctacaggattacgtagaagatgttgtcaat
gttgaccccttcgtacctcttgatgagattgaaggatatttgctgcctagggtgaaaact
agaaaaactaagaatctgaaaatggagtctgatgatttaaaggagaaaggtggctcatgc
tctcattcaccatcagactctacctcttcccaaataaaaagagcagaaatgctagttgat
gttctgaaagcgcaggagggaaaccccaatctggtgttttcttcacccgcggagacatcc
agctctccagaaaaagccttggactcagcagatacagtcaatgttcaaacagttcatgag
gaagaggagcataacgatttgcaagatggtggtgtttccaacatggacgatgttcacact
tcctcgaacttgctattttatttggaaggacagctactcaaccgaaaactgacactgtat
caatccattcttgaacagcaaactgaagctggacaaaataatatcctaagtgcaagcctg
tggagtcgtacacacaaagtaacttacagaagagatatgacagagaaaccaagttattct
aaacatagtcatgatgaggctctatcttctttcttatgtagaagaacctcattttttcac
tctccctattttgcttgcatattttcttctgaagaagacttgggtaagtcgggcccgact
tatgatatattatcccttctgaaaaggatggaaggcatcaatagattgagattttatctg
atgtatcgtgctagagtatctgagtttgcagaagggggaattgataattttgataagtta
attttatctgttgatgaagttccccaaaatgaatttgttaacaaaaagttaacagagaag
ctagaacagcaaatgcgagaccctatggctgtctctgctggggccatgcctgcttggtgt
agccagttgatcgcttggtgccccttcctgtttagctttgaagcgaggtgcaagtatttt
tacctggttgcattaggccgattgccacatcaggctcattcagattcacatgatgatgtt
agaggatccagtggcaggcagcaaaatcatggaagccttcctcgcaagaagattttggtt
catcgaaacaacatacttgaatccgccagccagatgatggaacttcatgctcgccaaaag
gttcttcttgaggtggtgtatagtgaagaggtgggtactggtcttggtccaacattggag
ttctatacgttagtctgccgcgagtttcagggtagtggcttaggtatgtggagagatgac
catgtccctcttcacagcagaacttcttcagaggctgagaattctggttatttggtggct
ccttatggacttgtcccttgtccatggtcgccttcgttaactgcagcaaatagcactaca
tactcagaagtgattagaaagttttctcttctgggacagatagttgccaaagctcttcaa
gatggtagggttttagatcttccattctccaaggccttctataaaattattctgggaaag
gaacttgatctgtatgatattcagacatttgatcctgcacttggtagaacactgttagag
ttcctagctcttatagaaaggaataagtatttgacatcacatcctgaagaaaatgtgcat
gatttcgatttgcgcttgcggagcactaaaattgaggacctgtgccttgattttacactt
ccgagatatccagattatgcacttaattctgaatctcagtcgaagatggttggcttttgc
atggtaaatctttataatttggaggaatatgttacattgattgttgatgcgacagtgaaa
tctggaatttctagacaagtggaagctttcaagttgggttttgatcaggttttccctatc
aaacatcttaaggttttcacagaagaagaattggagcgtttactatgtggagaacatgta
ctatggaattcggacgaacttttggaacacatcaaatttgaccatggctacactattagc
agttctccaattgtgaatttactggagatcatgctagagtttgatctggagcagcaaaga
gcattcgtgcagtttgtgacaggtgcaccccggcttccgaacgggggactggcttctctt
aaccctaaactgacaattgttcggaagcattgcagcaaggagatcaatgctgacttgcct
agtgtaatgacatgtgctaattatctgaagcttcctccatactcttctaaagaagttatg
aaagaaaagctactatatgccataaccgaagggcaagggtctttccacctgtcgtga
DBGET
integrated database retrieval system
