Salvia splendens (scarlet sage): 121792227
Help
Entry
121792227 CDS
T07627
Name
(RefSeq) dystrophia myotonica WD repeat-containing protein-like
KO
K24741
WD repeat-containing protein 20
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sspl04990
]
121792227
Domain-containing proteins not elsewhere classified [BR:
sspl04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121792227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_Nup120_160
EIF3I
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Cytochrom_D1
eIF2A
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
121792227
NCBI-ProteinID:
XP_042046033
LinkDB
All DBs
Position
2:complement(32460132..32466010)
Genome browser
AA seq
547 aa
AA seq
DB search
MMNNSGASNNMMSSSAASASGNNAPGPGLKTYFKTPEGKYKLQYEKTHPAGILHYAHGKT
VTQVTLAHLKERPMQAQSQSSSALGVSSGVRSAAARFLGGGNGSRALSFVGGNGGSKPVG
GSSTRIGSLGASSSNNVVGNPNFDGKGTYLVFNVGDAIFVSDLNSQDKDPIKSIHFSNSN
PVCHAYDPDAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKDGSINNSRCTC
IAWIPNGDGSFVVSHADGNMYAYEKNKDGSGDPSFPVIKDQTQFSVSHARYSKNPVARWH
ICQGSVNGIAFSADGAYIATVGRDGYLRVFDYKTEQLICGGKSYYGALLCCAWSMDGKYI
LTGGEDDLVQVWSMEDRKIVAWGEGHNSWVSGVAFDSYWLAPNSDGVGENIVYRFGSVGQ
DTQLLLWDLEMDELVVPVRRAPGGSPTFSTGSQSSHWDSACPVGTLQPSPSMRDVPKLSP
LVAHRVHTEPLSGLLFTQKSVLTVCREGHIKIWMRPGSAETQSTNSDTFMSTSLKEKAAI
AGKGGRQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaacagtggggcgagtaacaatatgatgtcctcgtcggcggcgtccgcgtct
gggaacaacgcgcccggccctggtttgaagacctatttcaagacgccagaaggtaaatat
aagctccagtatgagaagactcatcccgccggtatacttcactacgcccatggtaaaaca
gtcactcaggtgactctagctcatctcaaggaaaggccaatgcaggcacaatcacagtca
tcatctgctttaggtgtaagcagtggtgtgaggtctgcagcagctaggttcttaggtggt
ggtaatgggagtcgggcacttagttttgtaggagggaatggtggaagcaagcctgtgggt
ggcagcagtaccagaataggatcattaggggcttcaagttcgaataatgtggttggtaat
cccaactttgatggaaaagggacttacttggtgttcaatgttggggatgcaatttttgtc
agcgacttaaattctcaagataaggatcctataaagtctatacattttagtaattcaaat
cctgtttgccacgcatatgatcctgatgctaaagatgggcatgatttgcttattggttta
aactctggagatgtttattctgtgtctcttagacaacaattacaagacgttgggaagaag
cttgtgggggcccaacactataataaagatggttctattaataatagtcgctgtacttgt
attgcgtggatccccaatggagatggctcatttgtggtatctcatgcagatggaaatatg
tatgcatatgaaaagaacaaagatggctctggtgatccttcgtttcctgtaatcaaggat
cagactcaattttctgtatcacatgcccggtatagtaagaacccagttgctaggtggcat
atttgtcaaggttcagtaaatggaattgccttctcagctgatggtgcttatatagccacc
gtagggagggatggttacttgcgagtctttgactataaaaccgaacagcttatatgtggt
ggaaaaagttattacggagctcttttatgttgtgcttggagcatggatggaaaatacatt
ttgactggaggcgaggatgaccttgtgcaagtttggagtatggaggatcgaaagattgta
gcatggggagaaggacacaactcatgggttagtggagtagcatttgattcatattggctt
gctccaaattcagatggtgttggggaaaacatagtctatcggtttggttctgttggtcag
gacacacaattgctcttatgggatctagaaatggatgagcttgtagtgccagttcgccgt
gcccccggtgggtctccaactttcagtacgggaagccagtcgtctcactgggacagtgct
tgccctgtgggaaccttgcaaccatctccaagcatgcgagatgttccgaagctctcccca
ctggtagctcatcgtgtccacacagagcctctctctggtttgctattcactcaaaaatcc
gtcctaacagtatgccgtgagggtcacataaaaatctggatgaggccaggctctgccgaa
acccaatcaaccaactcggataccttcatgagcacaagcttgaaagaaaaagcggcaata
gctgggaagggaggcagacaatga
DBGET
integrated database retrieval system
