Salvia splendens (scarlet sage): 121792271
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Entry
121792271 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121792271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121792271
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121792271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
zf-CCHC_3
RRM_5
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
121792271
NCBI-ProteinID:
XP_042046077
LinkDB
All DBs
Position
2:complement(32776049..32779385)
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AA seq
310 aa
AA seq
DB search
MPRYEDRYGSSTRLYVGHLSSRTRSRDLEHVFSRYGRVRDVDMKRDYAFVEFSDPRDADD
ARYNLDGRDVDGRRITVEFAKGVPRGPGGVREYVGRGPAPGSGRCFNCGIDGHWARDCKA
GDWKNKCYRCGERGHIERNCQNSPKKLSSGRGRSYSRSPVRSRSPRRGGCSRSRSFSRSR
SYSRSRSPAARRGRDADYKERRSRCPLDESPDLKRAGTPKSRKLSPTPDRDVPREQSASP
SRGRVETEQDGYNSDSPKETSRSPVSPAARRYEESPYEENGRNRSPSPREDRSPVEDDDP
VRSPRGSASP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctacgaggataggtatgggagcagtactcgcctctatgttggtcacttgtcc
tctcggacccgatcccgggatcttgagcacgtttttagtagatatggcagagtacgcgat
gtggatatgaagcgagactacgcctttgttgaattcagtgatccacgggatgctgatgat
gctagatataatttggatgggcgtgatgtggatggacgccgcataactgtggaatttgcc
aagggtgtaccacgtgggcctggaggggttcgggagtatgtgggccgaggtcctgctcca
ggttctggccgctgcttcaattgtggcattgatggtcattgggctcgtgattgcaaagct
ggagactggaagaataagtgttaccgctgtggggaaagaggtcacattgagaggaactgc
caaaacagtcctaagaagctcagtagtggacgtggtcgaagttactcgagatctcctgtg
aggtcacgttctcctcgccgtggtggctgcagtaggagtagaagtttcagcagaagccgc
agctacagccggtcaaggtcccctgctgccaggcgaggacgtgatgctgattataaagaa
aggaggtcaaggtgcccacttgatgaaagcccagatcttaagagggctgggactcctaaa
tcaaggaagctcagtcctacacctgacagggatgtgccaagagagcaaagtgcttcccct
agtagaggcagggtggagactgagcaagatgggtacaatagtgatagcccaaaggagact
agccgtagtcctgtcagtcctgcagctaggagatatgaagagagtccttatgaggaaaat
ggccgcaatcgcagccctagtcctcgagaggacagaagccctgttgaggatgatgatcca
gtacgctctccccgcggtagtgcctcaccctga
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