Salvia splendens (scarlet sage): 121792285
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Entry
121792285 CDS
T07627
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial-like isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121792285
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
121792285
Transfer RNA biogenesis [BR:
sspl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
121792285
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
121792285
NCBI-ProteinID:
XP_042046099
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Position
2:33214354..33220977
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AA seq
792 aa
AA seq
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MAVRLVNGYRCCTVSPSPTALRCFLHHHNNFQLHSSTCFSISRRLRCRRISFGYESVRRY
PAQSLVDMVMEELHSIRKRGVARASNKLGLETSDQLLENKPGKKTLQKGLLLEFKKDSER
VLLAVVLKPDGKKNWMVSDQNGAMASIKPQQITFIVPGIKDFDHMEIPDFIQKAQDNLDP
ALLEFAWIELVEKNKSITVEELAEMMFGSAEPLESYSAYLLLSKDDVYFTTLETKGSYSV
YGPRPAVQVEELMRRKHAKEAAERELEEFVNLLRSARDTPLHAKPPKSMWSSDEKNQIKI
EILQAYAIDDCRNEDEKKTAGMQILKAIGLPKTASAAMNLLIDIGYFPVHVNLDILKLKI
HTDYAEEILMVAERLLLESPDQDEVERKDLTHLKVYAIDVDEADELDDALSATRLQDGRI
KIWIHVADPTRLVQPGSIIDKEAMKRSTSVFLPSATYPMFPEKLAMEGMSLKQGKHCKAV
TVSVVLHGGGGIAEYSVENSIIKPTYMLTYESATELLHLNLEEEAELRLLSEAATLRFQW
RRRQGAIDASTLEARIKVTNPDDPEPSIKLYVENQADPAMRLVSEMMILCGEVMATFGSV
NKIALPYRGQPQSNIDISDFAHLPEGPVRSSTIVKTMRAAEFDFRKPTRHGVLGLPGYVQ
FTSPIRRYMDLLAHYQVKAFLRGDSPPFSAGQLEGMASMVNMNIRLVRRLSSSSLRYWMI
EYLRRQPKEKKFSALVLRFIKDRVAAILLMEVGIQGSAWVSLGVQVGDEVKVLVEEAHPR
DDVLIFKEAQGI
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgcctcgtgaacgggtatcgctgctgcacagtgtcaccatcgcccaccgct
ctcagatgtttcctgcaccaccataataattttcagttgcactcctctacttgcttttca
atttcccggcgacttcgttgtcgccgcatatcatttggctatgagtcggtgcggaggtac
ccggcgcagagtctggtggatatggtgatggaggagctccactcaatccggaagcgcggt
gtagcacgcgcatcaaacaaattaggattggaaactagtgatcagcttcttgaaaataag
cctggaaagaagactctgcagaaaggattgttgctagagttcaagaaggactcggagagg
gtcttactagcagttgtgctgaaaccggatggcaaaaagaactggatggtttctgatcag
aatggtgcgatggcatctattaagccgcagcaaattactttcattgtccctggtatcaag
gactttgatcacatggagataccagactttattcagaaagcacaagataatctggaccca
gcactgcttgaattcgcgtggattgaacttgttgaaaagaataaatcaataaccgtggaa
gagcttgcagagatgatgtttggtagtgcagaacctctggagagctattctgcttatttg
ttgctttcgaaggatgatgtatacttcacaacactggaaactaaaggttcatattccgtt
tacgggccaagacctgctgttcaggtggaagaacttatgcgcaggaagcatgccaaagag
gctgcagagagggaacttgaagagtttgtcaatttactgagatctgccagggatacaccg
cttcatgcgaagcccccgaagtccatgtggagctctgacgagaaaaatcaaataaaaatt
gagattcttcaagcatatgcaattgatgattgtaggaatgaagatgaaaagaagactgct
gggatgcagattttgaaggccataggacttcctaaaacagcatcagcagcaatgaatctc
ctcatcgatattggttatttcccagtacacgtaaatcttgatatactgaagctcaaaatt
catactgattatgcagaagagattcttatggtcgccgaaaggcttttgctcgagtcacct
gaccaagatgaggttgagaggaaagatctcactcacttaaaggtttatgccattgatgtt
gatgaagctgatgagctcgatgatgcactaagtgcaactaggcttcaggacggccgaata
aagatctggattcatgtagcagatcctacaagattggtccagcctggaagcatcatagac
aaagaggcaatgaagaggagcacttctgtttttttaccatctgctacttacccgatgttc
cctgagaagttagccatggaaggcatgagtttgaagcaagggaagcactgcaaagctgtt
acagtttcagttgtgctacatggtggtggtggcattgcagaatactcggttgaaaattca
atcatcaaaccaacatatatgttaacttatgagagtgcaacagaactccttcatttgaac
ctggaagaggaggctgaactcagacttctttcagaggctgctacactgcgatttcaatgg
cgtcgaaggcagggtgcaatagacgcatctacattagaagccagaatcaaggtgaccaac
ccagatgatccagagccctcgatcaagctgtatgtggagaatcaagcagatcctgctatg
cgccttgtatctgagatgatgatactttgtggcgaagttatggccacttttggttctgtg
aataaaattgccttaccataccggggacaacctcagtcaaatattgatatatctgatttt
gctcatcttcctgaaggccctgttaggagttctactatagttaaaaccatgcgtgctgct
gaatttgatttcaggaagcctacgcgccacggagttttaggacttcctggatatgttcaa
ttcacatctcccatacgtagatatatggatctacttgctcactatcaggtaaaagcattc
ctcaggggagattctcctcccttttcagcaggacagctggaggggatggcttctatggta
aatatgaatataaggttagtgaggcggcttagctctagcagtctccgctattggatgata
gaatacctgagacggcaaccaaaagaaaagaagttttctgccttggtccttcgattcatc
aaagatagagttgctgcaatactcttgatggaggttggaatacaaggttctgcttgggta
tctctaggtgtacaagtaggtgatgaagtaaaagttctggtagaagaagcacatccacgt
gatgatgttcttatatttaaggaggctcaaggaatctag
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