Salvia splendens (scarlet sage): 121792296
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Entry
121792296 CDS
T07627
Name
(RefSeq) TBC1 domain family member 5 homolog B-like
KO
K18469
TBC1 domain family member 5
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121792296
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121792296
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
121792296
NCBI-ProteinID:
XP_042046114
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All DBs
Position
2:33381082..33384329
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AA seq
756 aa
AA seq
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MDNPLSQNPDSMWGRFFKISELERMLDQDLTRLYPERDSYFQTSVCQGMLRRILLLWCLR
NPEYGYRQGMHEILAPLLYVLHIDVENLSEVKRTYADHFVDKFDGFSFHENDLTYKFDFK
KFSESQGDNNGFENTSAKASSLYEFDPEIQTTVLLNDAYGAEGELGIVLSEKFMEHDAYS
MFDSLMSGSGGAIAMAKFYSHPSGKPHTGPPPVIEASSALYHLLYNVDSSLHSHLVELGV
EPQYFALRWLRVLFGREFSLEELLVIWDEIFAHENTVSSPAVACDAESNFALLESPRGAF
ICAFAVSMILNLRSSLLATENATISLQRLLNFPDDTKLAKLLAKAKSLCAIGRDANKLTP
VPIQSESYDRRKSNVTRGHSLSMDSSSTNTPPTVVPDSYWEEKWRVLHKEKGNKLSAGGD
QVPNRRNGWSERVRLHLSRTESDPSPSKKNERTKIPKPFVRRSLLDDLARKLGADEDTKE
DTVSDADVGIGGSVDVNREDVTDKNYESSSSAAGSEDNSSNFSEPSGPIHRSSDNVNEVE
RSSVASNSSMDENDARICVNGPECSPLPVSNPFDENENDTQMCVDNPECSHVYVSSHHDG
GSSKSAGNDEAVGKLATGIKEIKHLSGKFQWLWKFGRNVNEGTSVRTVPEDAKACSNGID
QNNFVDISTADGCNCSSETSKGETVDQNLRVSWKNIGQSMIENIQVLESVFQQDRGGQVA
GSSENLSKNGLVGKGQVTATAALKELRKISNLLSEM
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggacaatccactatcccaaaacccagatagcatgtggggtcgattcttcaaaatttct
gaactggagagaatgttggatcaagatttgacgcgcttgtatcctgaaagagacagctat
ttccagacaagtgtatgccaaggcatgttaaggcggattttgctgctctggtgccttaga
aacccagaatatggctacagacaaggtatgcatgaaatcttggctcccctgttatatgtt
cttcatattgatgtggaaaatctgtcagaagtgaaaagaacatatgctgaccactttgtt
gataaatttgatggcttctcatttcatgaaaatgacttgacatacaaatttgacttcaag
aaattctcagagtcccagggagataataatggatttgaaaacacttctgcaaaagctagt
agtctctatgaatttgatcctgagattcaaactacagttttactaaatgatgcctatgga
gcagaaggtgaacttggcattgtcttgtctgagaaatttatggaacatgatgcctattcc
atgtttgattctttgatgagtggatctggtggtgccatagcaatggccaagttttactct
catccttctgggaagccacataccggaccccctcctgtaattgaagcttcttctgccctt
tatcacttgctttacaatgttgattcatctcttcattctcaccttgtagagttgggagtt
gaaccccagtattttgcacttcgctggctacgggtattatttggacgtgaattttctttg
gaagagcttctggtaatctgggatgaaatttttgcacatgaaaatacggtgtctagtcct
gctgttgcttgtgatgctgaatccaactttgcacttcttgagtcacctaggggagcattc
atatgcgcttttgcagtttctatgatacttaacttgaggtcttcattgcttgccactgag
aatgctactatctctcttcagagattgttgaattttcctgatgatactaaacttgcaaag
ctattggcgaaggcaaaatccttgtgtgccatcggcagagatgcaaacaagttaacccct
gtgccaattcaatcagagtcatatgacagaaggaagtcaaacgtaactaggggtcatagc
ctttctatggattcttcttctacaaatactcctccaactgtggtacctgatagctactgg
gaagagaaatggagagttttgcataaagaaaaaggaaataagctaagtgctgggggagat
caagttccaaatcgcagaaacggttggtcagaaagagtaagactccacttgtctaggact
gaatccgatccttccccatcaaagaaaaatgaaagaaccaaaattccaaagccatttgtc
aggagaagtttgttggatgatcttgcacggaagcttggagcagatgaagatactaaagag
gatacagtgtctgatgcagatgttggcatcgggggttcagtggatgtcaacagagaagat
gtaactgataaaaactatgagagttcatcaagtgctgctgggagtgaagacaattcttcc
aatttctcagagccttctggtcctattcatagaagtagtgataatgtgaacgaagtagaa
agaagtagtgttgcatcaaactcatcaatggatgaaaatgatgctcggatatgtgttaat
ggtcctgaatgctcccctctgcctgtctcgaatccatttgatgaaaatgaaaatgatact
cagatgtgtgtagataatcctgaatgctcccatgtatatgtctcaagccaccatgacggc
ggctcatcaaaatcagcaggaaatgatgaggctgtagggaaattagctacagggataaag
gagattaaacatctatctgggaagtttcagtggttatggaagtttggaaggaatgtgaac
gagggcacatctgtgagaactgttcctgaggatgcaaaagcttgcagtaacggaattgac
cagaacaattttgttgatatttccactgccgatgggtgtaactgctcatctgaaaccagc
aagggggagacagtggaccaaaatttgagggttagttggaagaatattggtcaatccatg
attgagaacattcaggtgctggagtctgtgttccagcaggatcgtggtggtcaagttgca
gggtcctcagagaacttgtcgaagaatggtcttgttggtaaaggacaagttacagccacg
gctgcactcaaagagctcagaaagatcagcaatcttctctctgagatgtga
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