Salvia splendens (scarlet sage): 121792361
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Entry
121792361 CDS
T07627
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121792361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121792361
03012 Translation factors [BR:
sspl03012
]
121792361
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121792361
Translation factors [BR:
sspl03012
]
Eukaryotic type
Release factors
121792361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
She2p
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
121792361
NCBI-ProteinID:
XP_042046201
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Position
2:complement(34499175..34502881)
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AA seq
436 aa
AA seq
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MAEGQENDKNIEIWKIKKLIKALEAAKGNGTSMISLIIPPGDQIARVTKMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYSKVPPNGLVLYTGTIITDDAKEKKVTFDFAPFKAIN
ASLYLCDNKFHTEPLSQLLESDEKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKFFEEISQDTG
KYVFGVDDTIKALEMGAVETLIVWENLDINRYTLKNSVTNEIVIKYLNKEQERDQSNFQD
AETSGELEVQDKMPLLEWFANEYRNFGCSLEFVTNRSQEGSQFCRGFGGIGGILRYQLDI
RSFDEPSDEGEFYESD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggccaggaaaatgataagaatattgaaatatggaaaataaagaaattgatt
aaggctctagaagctgctaaaggaaatggtaccagcatgatatcccttataattccccca
ggtgatcaaatagcccgggtcaccaaaatgctggcagaagagtatggaacagcgtctaat
attaaaagcagggtgaatcgtcaatcagtgctaggtgcaatcacctctgcgcagcagagg
ctaaagttgtatagcaaggtcccaccaaatggcctcgtgctctatactggtactataatc
acagatgatgcaaaagagaaaaaggtcacgttcgactttgcaccttttaaggccataaat
gcttctctttacctttgtgacaataaatttcatacagagcctttgagtcaactcttggag
tctgatgaaaagtttgggtttatcgtcatggatggtaatgggacccttttcggaacctta
agtggtaatacaagagaagtgcttcacaagttctccgttgatcttccaaagaaacatgga
agaggaggacaatcagctcttcgatttgcccgtcttcgaatggagaagcgtcacaactat
gtgaggaagactgcagagcttgccactcaattcttcattaatcctgctacaagtcagccg
aatgtgtcagggttgatacttgctgggtcagctgatttcaaaactgagctgagtcaatct
gatatgtttgatcctcgcctccaagccaagatactgaatgtggtagatgtttcctatggt
ggagaaaatggtttcaatcaggccattgagctatctgctgagattttgtctaatgttaag
ttcatacaagaaaaacgcttgatagggaagttctttgaagaaatcagtcaagatactgga
aaatatgtatttggtgtggatgatactataaaagctttggagatgggagctgttgaaacg
ttgatagtgtgggaaaacttggatataaatcgttatacactaaaaaacagtgtgaccaat
gagattgtcatcaaatacttaaacaaggaacaagagcgtgaccagagcaacttccaggat
gctgaaacatccggagagttggaggttcaagacaaaatgcccttactggagtggtttgca
aatgaatatagaaactttggttgttcccttgaatttgtgacaaatcgctcccaggaagga
tcacagttctgccgaggatttggtggcattggtggaattcttcgttaccagcttgacatt
cgatcctttgatgagccatccgatgaaggagagttttatgagtcggactaa
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