Salvia splendens (scarlet sage): 121792398
Help
Entry
121792398 CDS
T07627
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121792398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121792398
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121792398
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121792398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
TerY_C
FAIM1
Motif
Other DBs
NCBI-GeneID:
121792398
NCBI-ProteinID:
XP_042046254
LinkDB
All DBs
Position
2:35194017..35196656
Genome browser
AA seq
316 aa
AA seq
DB search
MESSIECVTDGLMDEDEISSQFSSSKSSHTNINTNNLNGMVINPATSVHELLECPVCTNS
MYPPIHQCHNGHTICSTCKVRVHNKCPTCRHELGDIRCLALEKVAESLELPCKYSTLGCP
EIFPYYSKLKHEAACNFRPYTCPYAGSECSVVGDIPYLVAHLRDDHKVDMHSGCTFNHRY
VKSNPRDVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGNEMDARNYSYSL
EVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWK
EQQNPDGGACIPNFCS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagcattgaatgcgtaactgacggattaatggacgaagatgagatctcttct
cagttttcgtcttcgaagtcgtctcacactaatatcaacaccaataatctgaatgggatg
gttatcaatccggcgacgagtgttcacgagcttctagaatgccctgtttgcaccaattct
atgtaccctccaatccatcagtgtcacaacggtcataccatatgttcgacatgtaaagta
agggttcataacaagtgtccgacttgtaggcatgagcttggtgatataagatgtttagca
ctagaaaaagttgctgaatcacttgaacttccttgcaagtattccacccttggatgcccc
gagatctttccttattatagtaagttgaaacatgaggctgcctgtaattttaggccttac
acctgcccatatgctggatcagagtgctccgtcgttggggatattccttacctagttgct
cacttacgtgacgatcacaaagtggacatgcattctggatgcacattcaatcatcgctat
gttaaatcaaatcctcgggatgtagagaatgccacatggatgctaactgtcttccattgt
tttggacagtatttttgtctacatttcgaagctttccaattgggcatggctcctgtctac
atggcatttcttcgattcatgggaaacgagatggatgcccggaactacagctacagtttg
gaggttgggggaaacggccggaagcttatatgggagggcacccctcggagcatcagagac
agtcaccggaaggttagggacagccacgatggcctaatcatacaacggaatatggccctc
ttcttctcaggaggggacaggaaagaacttaagcttcgtgtgacggggcgaatatggaag
gaacaacagaacccagatggtggagcttgcatacccaacttctgcagctaa
DBGET
integrated database retrieval system
