Salvia splendens (scarlet sage): 121792444
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Entry
121792444 CDS
T07627
Name
(RefSeq) ATP-dependent helicase BRM-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121792444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121792444
03036 Chromosome and associated proteins [BR:
sspl03036
]
121792444
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121792444
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121792444
Chromatin remodeling factors
BAF complex
121792444
PBAF complex
121792444
GBAF(ncBAF) complex
121792444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
121792444
NCBI-ProteinID:
XP_042046327
LinkDB
All DBs
Position
2:complement(35813387..35824989)
Genome browser
AA seq
2204 aa
AA seq
DB search
MQSGGGPQQGGGGGGHGRSNAASASASLSPSSSAGSAFDQQQQQRQQRQSMAQQFMKRPE
GNDALLAYQAGTIHGPLGVGNFSTASGSMQLPQQPRKFIDLGQQHGSPNNPDQSHNRSQG
VELQMMNPMQQAYMQYAFQSSQQKSTLGMQSQQQVRPAMFGSLGKDQEMRMANMKMHELM
SMQGANQSQGSSSKKPSEQVAQSDKHADNSHRPMLDQRSDTKPNYPPLGGQGIQPAPMQA
PQSQQNIMSMTNNQMAMAAQMQSMQALALERNIDLSNPANANVVAQLIPLMQSRMAAQQK
ANENSTGVPSVSFNKQHVTSPPVGNESSPHGNSSSDVSGQSGSSKARQAVSPSTLGVNSN
AAPPNNSSTISAQQFSVQHLPHRQQSSLGHGMPPMQPSQSPGNPNEGVDSFLAKTSVAKS
SQAQNARQPNRSPQSATPSNEGDVGNPSTSQGGPSSQLKQLHTGFTKQQLHVLKAQILAF
RRLKQKGDVTLPRELLQAIAPPPLDLQMQQVLSPPANAVKDKLSGGNVEERAQDAKSVAG
VVNMKTDGSGDDRTAAATASMQNSVSAAKEQRFVGPPGKEEPQYIGSSGKCEQESEPGNQ
KTPVRNDVAADRGKGIATQSSASDPVQAKKPIQASNTPQPKDAGSTRKYHGPLFDFPIFT
RKHETLGSSMMNNNSNLTLGYDIKDLFVDEGREIHKRKRAERIGKIDKILGVNLERKRIK
PDLVTRLQIESKKLQLAECQARLRDEIEQQQQEIMAMPDRPYRKFVRLCERQRQDLNRQS
QANQKATREKQLKSIFHWRKKLLEAHWAFRDARTARNRGVHKYHEKMLREFSKLKDDDHN
KRMEALKNNDVERYREMLLEQQTNVPGEAAERYAVLSSFLSQTEEYLHKLGSKITATKNQ
QEVEEAAHAAAAAARAQGLSEEEVRAAAACAREEVSIRNRFSEMNAPRDSQSVNKYYNLA
HAVNERVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAH
LMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGGKDQRAKLFSQEVLAMKFN
VLVTTYEFIMYDRSKLSKIDWKYIVIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQ
NDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPAHEDDWLETEKKVIIIHRLHQIL
EPFMLRRRVEDVEGSLPPKVSIVLKCRMSAIQGAIYDWIKSTGTLRVDPEDEHRKCQKNQ
NYQAKTYKTLNNRCMELRKACNHPLLNYPYFSDFSQDFLVRSCGKLWVLDRVLVKLQRTG
HRVLLFSTMTKLLDIMEEYLQWRRLVFRRIDGMTSLEDRESAIVEFNRPDTDCFIFLLSI
RAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVGKISSHQK
EDEFRSGGVVDSDDDLAGKDRYVGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEER
RLTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEELDWAEDMTRYDQV
PDWLRANTQEVNTTIAKLSKKPSKNAVYGGMQPPVEAASEISERRRGRPKGKTPIYTELD
DENGEFSEASSNDRNGYSVQEEEDGDIGEFEDDESTEAPGVNKDQSEEDAPVSADGYEYQ
RALDNVRNNSILEEAGSSGSSSHSRKLMRMVSPSVSSQKFGSLSALDGRPGSRSKKLADE
LEEGEIAVSGDSPMNQQHSGSWIQDRDEGEDEQVLQPKIKRKRSIRLRPRPVRAEEKPSD
RSSFRRGDPTMLPVHMDNKYKIQASDDRSHKVLGDTSSMKSEKIDSSIKNKRNLPSRRNT
ANVQSTLRSGRVNYGSAVAYDSSEHLTENLDTKVVKGPKTSGPKMSEVVLRKCKTVISKL
QRRIDYEGHQIIPQLTELWKRNDYASGDGDCLLDLRKIHNRVDKSEYSGVMGFVSDVQLM
LKSSMQYFGFSYEVRSEAKKVHDLFFDIIGVAFSDTDFREARSSMSFTAPVSTPATGPSS
RQFPSAQGKRQTLVKDVDSENTPFPKTQTRTPIHAVESSKARNLMPHKESRLGSGSSRDL
GQPDDTRPFTHPGDLVICKKKRKDREKSGTKSGNGSAGPLSPTCIGRGMKSPGSISGAKD
IGSSQHGWGPLSPQQGNSSGGSVGWANPVKRMRTDAGRRRPSHL
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccggtggtgggccccaacagggcggaggcggcggcggccatggcaggagtaat
gccgcttcggcctctgcttctctgtccccatcgtcctccgccgggtccgcatttgatcag
cagcaacagcagaggcagcagagacagtcaatggctcaacagtttatgaagagacctgaa
gggaatgacgcccttctagcataccaagctggcacaatacatggacccctgggggtgggt
aatttttctacagcatctggctccatgcaactgccccaacagcccaggaagttcattgat
ttgggccagcagcatggttccccaaataatccggatcaaagtcataatagaagtcaaggt
gttgagctacaaatgatgaatccgatgcaacaagcttatatgcaatatgcatttcagtca
tcccaacagaaatcgacattggggatgcaatcacagcagcaggtgaggccagcaatgttt
ggttctcttggcaaagatcaagaaatgaggatggcaaacatgaaaatgcatgagctcatg
tccatgcaaggagcaaatcagtctcagggttcctcctccaagaaaccctccgagcaggtt
gctcagagtgacaaacatgcagataacagtcatcgccctatgctcgatcagagaagtgat
accaaaccgaactatcctccattaggtggtcagggaatccaacctgcacctatgcaagct
ccacaatctcagcaaaatatcatgagcatgacaaacaatcagatggctatggctgcacag
atgcagtcaatgcaggcactggctcttgagcgtaatattgatctgtcaaatcctgcaaat
gcaaatgtggttgcacagcttattccactaatgcagtccaggatggctgctcagcaaaaa
gctaatgaaaatagtactggtgtgccttctgtatcttttaataaacagcatgttacctca
ccgccagttggaaacgaaagttctccccatggtaattcctcaagtgatgtgtcaggacaa
tctgggtcatctaaagctaggcaggcagtttcacctagtactcttggtgtgaattccaat
gcagctccacctaacaattctagcaccatttccgcccaacagttctctgtgcagcatttg
ccccataggcagcaatcctcccttggtcatggaatgcctcctatgcagccttcacagtca
ccagggaatccgaacgaaggggttgatagttttcttgcaaaaacttcggtagcaaaatct
tctcaggcgcaaaatgccagacagcctaatcggtctcctcaatctgcaactccatctaat
gaaggggatgtgggtaatccatcaacatctcagggtggacccagttcacagttgaagcaa
ttgcacactggttttaccaagcagcagctgcatgttcttaaagcacagatacttgcattt
aggcgtctgaagcagaaaggtgatgtaactttgccacgtgaactgctccaagctattgct
cctccaccacttgatttacagatgcaacaggtgctttcgcctcctgcaaatgctgtcaag
gacaaattatctggaggaaatgtagaggagcgggctcaggatgcaaaatcagtagctgga
gtagttaatatgaaaactgatggttcaggagatgataggactgctgctgcaactgcgagc
atgcagaactctgtttctgcagcaaaggagcagaggtttgtgggtcctcctggaaaagaa
gagccgcaatatattggtagttctgggaaatgcgaacaggagtctgaaccgggcaatcag
aaaactcctgtcagaaatgatgttgctgcagacaggggtaaaggaattgcaacacagtca
agtgcttcagatccagtgcaggctaagaaacccattcaagcaagtaatacaccccaacct
aaggatgctggttcaacacgaaaatatcatgggccgttatttgatttccccattttcact
agaaaacatgagacccttggatcctctatgatgaacaacaatagtaacttgactttaggt
tatgatatcaaagatctttttgttgatgaaggcagagagatccacaaaaggaaaagggca
gaaagaattgggaaaattgataaaatacttggtgttaacttagagaggaagagaatcaaa
ccagatcttgttactcggctacaaattgagtcaaaaaaacttcagcttgctgagtgccag
gcacgcttgagggatgagattgagcaacagcaacaggaaataatggctatgcccgataga
ccatatcggaaattcgttcgactgtgtgaacgtcagcgacaggatcttaacaggcaatca
caggccaatcagaaggcaactagggagaagcaactaaaatccattttccattggcgcaaa
aagcttcttgaggcacattgggctttccgtgatgctcgaactgccaggaataggggagta
cataagtatcatgaaaagatgttgagggagttctccaaactgaaggatgatgaccataat
aaaaggatggaagccttgaaaaataatgatgtggaaagatatagagagatgcttctggaa
caacaaactaatgtacctggggaggctgcagaaagatacgctgttctctcatcattctta
agtcaaactgaggagtatcttcacaaattgggtagtaaaataacagccactaaaaatcag
caggaagttgaggaggcagctcatgcagctgctgctgctgcacgtgcccagggtctctca
gaagaagaagttagagctgctgctgcttgtgcgagagaagaagtctcgataaggaaccgg
ttttcggagatgaatgcaccaagagatagtcaatccgttaacaagtactacaatctggca
catgctgtgaatgaaagggtcataagacagccttcaatgctacgagctggaactctacga
gactatcaacttgttggtctgcagtggatgctatcattatacaataacaaattaaatgga
attttggcagatgagatgggtcttggcaaaactgtgcaggtgatggccttgattgctcat
ttgatggagttcaaaggaaattatggccctcatcttattattgttcccaatgctgtgctt
gtcaactggaagagtgaattgcatacttggcttcctagcgtttcctgtatatattatgtt
ggtgggaaagaccaaagggcgaaattgttttctcaagaagttctagccatgaagtttaat
gtccttgtgacaacctatgagttcatcatgtatgatcgttcaaaactttcaaaaattgat
tggaaatatatcgtaattgatgaagcacaacggatgaaggacagagagtcagtattagct
cgtgaccttgataggtatcgctgccaaaggcgtttgcttcttacagggacaccattgcag
aacgaccttaaggagctttggtctcttttaaacctactgctcccagaagtttttgataat
agaaaagcatttcatgattggttctctcaaccattccaaaaggaagggcctgcacatgaa
gatgactggcttgagacagagaagaaggtgataataatccacaggctacatcaaatattg
gaaccatttatgcttcggcggcgtgttgaagatgtagaaggatcacttcctccaaaggtc
tcgattgttttgaaatgtcgaatgtctgcaatacagggtgccatttatgattggatcaaa
tcaaccggcactctcagggttgaccctgaagatgaacatcgcaagtgtcaaaagaaccaa
aattatcaggctaaaacttacaaaactttaaataatagatgcatggagctaaggaaagct
tgcaaccatccattgctaaactacccgtatttcagtgacttctcacaggatttccttgtg
aggtcttgtggaaaattgtgggttctggatagagttttggtgaagcttcagagaacggga
cacagggtactgctctttagtaccatgaccaaacttcttgatataatggaggaatatttg
cagtggcgaaggcttgttttcagaagaattgatgggatgactagcttggaagaccgtgaa
agtgctatcgttgagtttaatcgaccagacaccgattgttttatcttcttacttagcatt
cgtgctgctggacggggtctcaatcttcagtctgctgacacagtgatcatatatgatcca
gatccaaacccaaaaaatgaggaacaggctgttgctcgtgcccaccgtattgggcagacg
agggaggtgaaagtcatctacatggaagctgtggttggaaaaatatccagccatcagaaa
gaggatgaattcaggagtggaggagtagttgactctgatgatgaccttgctggaaaggac
cggtatgtgggttcaattgagagcttgattcggaataatattcaacagtataagattgac
atggctgatgaagttataaatgctgggcggtttgaccagaggactacacatgaagagagg
cggctaactttagaaacacttttgcatgatgaagaaagataccaagaaacagttcacgac
gttccttctcttcatgaggtaaaccgtatgattgctaggagtgaagaagaagtggagctt
tttgatcaaatggatgaagaacttgactgggcagaggacatgactcgatatgatcaggtc
cctgattggcttcgtgctaatacacaagaagtaaataccaccattgctaagttatcaaag
aagccatcaaagaatgctgtatatggtggaatgcagcctcctgtggaagcagcttctgag
atttctgagaggaggagagggcggcctaagggaaagactcctatttatactgaattagat
gatgaaaatggagaattttctgaagcaagctccaatgatagaaatggatattctgttcaa
gaagaagaagacggagacattggggagtttgaagatgatgaatccactgaagcacctgga
gttaataaagatcaatcagaagaagatgctcccgtttctgctgatggatatgaataccaa
agagctttggataacgtcagaaataatagcatacttgaagaagctggctcttctgggtcc
tcttcacatagtaggaagttaatgcgcatggtctcaccttccgtgtcttctcaaaagttt
ggatcactttctgcattagatggcaggcccggctcccgatcaaagaaactggcagatgaa
ttagaagaaggtgagattgctgtatctggagattctcctatgaatcagcagcattctggt
agctggatccaagatcgtgatgaaggtgaagatgaacaggtcttgcaacctaagataaaa
cgaaaacggagtattcggcttcgcccacggcctgttagggctgaagagaagcccagtgac
aggtcatcttttcgtcgtggtgatcctactatgttaccagtacacatggataataaatac
aagattcaagcaagtgatgaccgttcccataaagttcttggagatactagttcgatgaaa
tcagagaaaattgattcatctatcaagaacaaaagaaatctaccatcaaggagaaatacc
gctaatgtgcaaagtactcttagatctgggagagtgaactatgggtctgctgttgcatat
gattcctctgaacatcttacagaaaacttggacactaaagttgtgaaggggcctaaaact
agtggccctaagatgtccgaggtcgttctgagaaagtgcaagactgttataagcaagctc
cagagaagaatagattatgaaggtcatcaaataataccacagctaactgaactgtggaaa
agaaatgattatgccagtggagatggtgattgccttttggatttgagaaagattcacaac
cgtgttgacaaatctgagtacagtggagtcatggggtttgtgtctgatgtgcagcttatg
ttgaagtctagcatgcagtatttcggtttttcatatgaggtgaggtcggaggcgaagaaa
gtccatgatctctttttcgatataattggggtagcattctcagatactgattttcgagaa
gccagaagttccatgtctttcactgctcctgtttctacgccagccaccggtccatcttca
cgacagtttccttctgctcaggggaagcgccagacattagtcaaagacgtggattcagaa
aatactcctttccctaagacacagacccgcacgcccattcatgctgtcgagagttctaaa
gccaggaacttgatgcctcacaaggagtcgaggcttggaagcggcagcagtcgggatctt
ggccaaccagatgacactcgccctttcactcaccctggggatctcgttatctgcaaaaag
aagaggaaagacagggaaaagtcgggtacgaagtctggaaacggttcagcaggtccattg
tcacctacatgcatcggacgtgggatgaagagtccagggtcaatctcaggcgctaaagat
attggctcgagccaacatggctgggggcccctttcccctcaacaagggaacagcagcggc
ggctctgtcggctgggcgaatcctgtaaagagaatgagaactgacgctggaaggcggcgg
cctagccatttgtga
DBGET
integrated database retrieval system
