Salvia splendens (scarlet sage): 121792678
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Entry
121792678 CDS
T07627
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121792678
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121792678
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
PsaS
Motif
Other DBs
NCBI-GeneID:
121792678
NCBI-ProteinID:
XP_042046649
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Position
2:38644920..38646597
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AA seq
413 aa
AA seq
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MAIFFKIFAFSIFLLLVIATTAASRSHNGTENVVDDPAAIAAMVDMTIRNRTESRKLESL
SCGTGNPIDDCWRCDPNWIRNRRRLADCAIGFGRKAVGGRDGRYYVVTDPSDEDAMNPRP
GTLRHAAIQDRPLWIVFKRDMVITLKHELLINSFKTIDGRGADVHIANGGCLTIRGVTNV
IVHGLSIHNCKPTGNAMVRTSPSSYGYRTMADGDAISIYASRHVWIDHNSLAKCADGLVD
VTMGSTAITISNNHFSHHNEVMLLGHSDSYMGDKGMQVTVAYNHFGEGLIQRMPRCRHGY
FHVVNNDYTSWEMYAIGGSANPTINSQGNRFLASNNPYAKEVTKRIVNDETWKSWNWKSE
GDRLLNGAYFTASGKREASSYARASSLTAKPSSLVATLTSDAGALHCRKGVRC
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttcttcaaaatatttgcgttctctatatttctgctgctcgtcattgcaact
accgccgcatcaagatcacacaatggaactgaaaatgtagtagatgatcccgcagctata
gctgccatggttgatatgactattcgaaaccgaaccgaatcgaggaagttggagtcctta
tcatgtgggacaggaaaccctatcgacgactgttggcggtgcgaccccaactggatccga
aatcgccgccgtctggccgactgcgcgatcggcttcggccgcaaggccgtcgggggccgg
gacggccgctactacgtcgtgaccgacccgagcgatgaggacgcgatgaacccacgccca
ggcaccctcaggcatgccgcgatccaggaccggcccctgtggatcgtgttcaagcgcgac
atggtgatcacgctcaagcacgagctcctcattaacagcttcaagaccatcgacggacgc
ggcgccgacgtccacatcgccaacggcgggtgcctcaccatccggggcgtcaccaatgtg
attgtccacggcctcagcatccacaactgcaaacccaccgggaacgccatggtccggacc
tcgccctccagctacgggtaccggaccatggcggacggcgatgcgatatcaatctacgcg
tcgaggcacgtgtggatcgaccataactcgctggccaaatgtgccgacgggctcgttgat
gttaccatgggatcaaccgcgattactatttccaacaatcacttctctcaccacaatgag
gttatgttgttaggacacagtgactcatacatgggagacaaggggatgcaagtaactgtg
gcatacaatcattttggggagggcctaatccaaaggatgccaaggtgcaggcatgggtat
tttcatgtggtaaacaatgactacacttcatgggagatgtatgctattggtggtagtgca
aatcccaccatcaacagccaaggcaacagattccttgcctccaacaacccttatgctaaa
gaggtaacgaagagaatagtgaatgatgagacgtggaaaagctggaactggaaatcggag
ggtgatcgtctgctcaatggcgcatatttcacagcgtcagggaaacgggaagcaagcagc
tacgctagggcctcaagcctcacagccaagccttcttcgttggtagcaacactcaccagc
gatgccggggcactacactgccgcaaaggcgtccgttgctga
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