Salvia splendens (scarlet sage): 121792787
Help
Entry
121792787 CDS
T07627
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121792787
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121792787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-GeneID:
121792787
NCBI-ProteinID:
XP_042046809
LinkDB
All DBs
Position
2:39734922..39739019
Genome browser
AA seq
607 aa
AA seq
DB search
MSAQVTPAKRPLDQSLTDVRSERKSQKSEALGSDIAPFNASSRQVIRVLCPASRIRFING
KDGSIVSQIGQATGAKVCVEEKVLECNERVITIVAPDKAKEMVSGQVKDEDRETKIPDSS
ENPEEDGEGNKEHGVRVDHSKSDKDKENSAVQKALLAVFNRMVGMFAGSKKGEEEGKKKF
SHVRLLVFHGQVGRLLGRSGCVMKQMTSESGAVIQILPKNKLPSCASSTDDLVQISGTHD
AIRKALLSVSQELLERIPKYRDPFLWCSSSSQSHSFGAPRQDRCPPPHNPFHGHGAPYPS
GFLEGGAGMNFPPVVMTYRVLCNEEKVGGVIGKGGTIIKALQHESGCDIKVVASTGETED
RIITISGPAHPDDAVSPAQDGVLRVQARIFRSAPVSKDKSLVAKLLVSSHQIGCLLGKSG
SVISEMRKSSGAYICILSKNQVPKNASENEEVVQVSGDLEAVQEALVQITSRLKKHFFQA
PYMGRREFSPSPTFSNRGPPFNNFDASVGLPPVGGFHPREHDDQQPVSTSTTVEVVVPSF
AVPAIYGDEGGCLRQIREISDAEVTITNPKDGASETVIILSGTPEQTIAAQSLLQAFVIC
EMEALNR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcaagttacacctgctaagaggccactcgaccaaagtcttacagatgtaaga
agtgaaaggaagagccagaaatcagaagctttaggttctgatattgcaccatttaatgca
tcatctagacaggttataagagtactttgcccagcttccagaattcgcttcattaatgga
aaagatggcagcatcgtatctcaaataggccaagcgactggagcaaaagtgtgcgttgag
gaaaaagtccttgagtgtaatgaaagagtcataactatagtagctccagataaagctaag
gaaatggtgagcgggcaggttaaggatgaagacagggagactaaaatccctgactccagt
gagaaccccgaggaagatggggaaggcaacaaagagcatggtgttcgagtcgatcactct
aaatcagataaggacaaagaaaattcagctgttcagaaagctttgttagctgtgtttaat
agaatggtcggcatgtttgctgggtcaaagaaaggtgaagaagaaggtaaaaaaaagttt
tcacatgttaggctacttgtcttccatggtcaagtaggccgtttgttaggaagatctggc
tgtgtgatgaaacaaatgacatctgaaagtggagcggtaatacaaattcttccaaagaat
aagctgccttcttgtgcatcttcaactgatgacctggttcagatctctggtactcatgat
gccatcaggaaagctcttctatctgtttcccaggaacttcttgagcgtattcctaagtat
cgggatcctttcctttggtgctcctcctcatctcagtctcattcctttggtgctcctcgg
caggataggtgtccacctccgcataatcctttccatggacatggagcaccctatccatct
ggatttctcgaaggtggtgctggtatgaattttcctcctgtggttatgacttaccgggtg
ctgtgcaatgaggaaaaggtgggtggtgtaattggaaagggaggtactattatcaaagct
cttcaacatgaatctggctgtgatatcaaggtcgtagctagtacaggagaaacagaagat
cgcatcattaccatatctggtcctgctcacccggatgatgcagtatctcccgcacaagat
ggcgtgcttcgcgtgcaagcaagaatatttaggtctgcaccagtaagcaaggataaaagc
ttggttgcaaaactccttgtctcctctcatcaaattggatgtcttcttggtaaaagtggt
tcagtgatttctgaaatgagaaagtcaagtggagcttacatctgtattctcagtaaaaac
caggttccgaagaatgcctcggaaaatgaggaagttgttcaggttagtggagaccttgaa
gcagttcaagaggctcttgtgcagataacatcaaggttgaagaagcatttcttccaggcc
ccatacatggggagaagagagttttcaccttctccaactttctctaatcgaggtccacca
ttcaacaattttgatgcttctgtgggccttcctccagttggcggcttccatccacgtgaa
catgatgatcagcaacctgtttccacaagcactactgtggaggttgttgttccaagcttc
gctgttcctgctatttacggagatgaaggtggatgcctgagacaaattcgcgagatttct
gatgcagaagttaccatcaccaatcctaaagacggagcatcagaaaccgtgatcatactc
tccgggactcccgagcagactattgctgcacaaagtctacttcaggcatttgtaatatgc
gaaatggaagccctgaatcgttga
DBGET
integrated database retrieval system
