KEGG   Salvia splendens (scarlet sage): 121792805
Entry
121792805         CDS       T07627                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03082  ATP-dependent chromatin remodeling
sspl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    121792805
   03083 Polycomb repressive complex
    121792805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sspl03036]
    121792805
Enzymes [BR:sspl01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     121792805
Chromosome and associated proteins [BR:sspl03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     121792805
   HDAC complexes
    Sin3A-HDAC complex
     121792805
    BRAF-HDAC complex
     121792805
    REST complex
     121792805
    SHIP complex
     121792805
    MiDAC complex
     121792805
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     121792805
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    121792805
  Chromatin remodeling factors
   NuRD complex
    121792805
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 121792805
NCBI-ProteinID: XP_042046838
LinkDB
Position
2:complement(40062129..40067344)
AA seq 464 aa
MDTGGNSLPGGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRMRMTHALLAHYGMLQHMH
VLKPNPARDKDLARFHADDYVNFLRTITPETQQEQLRQLKRFNVGEDCPVFDGLYSFCQT
SAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
IDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGFGKGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEIFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFN
VPLLLVGGGGYTIRNVARCWCYETSVALGIELDDKIPQHEYYEYFGPDYTLHVAPSNMEN
KNSRHLLEEIKSKLLENLSRLQHAPSVQFQERPPDSELPQMEEDHDGEDERYDPDSDMEL
DDERKPLPGRVKSELSEPEPKDMDVVKEDEPDREVDLKCSEPPA
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggataccggaggcaattctctaccaggtggagccgatggggtcaagcggaaagtaagc
tatttctatgaccctgaggtggggaattattactacgggcaaggtcacccgatgaagcct
cacaggatgcgcatgacgcacgcacttcttgcccattatggaatgttgcagcatatgcac
gttctcaagccgaatcccgccagagacaaagatctcgccagatttcacgctgatgattat
gttaattttctgaggaccatcacacctgagacgcaacaggaacagctccggcagctgaag
aggtttaatgttggtgaagactgtcctgtattcgatggtctgtactcgttctgccagact
tctgcaggtggttcggttggtggggcggtgaagctaaatcatggtcattgtgatatagca
gtgaattgggctggtgggttacatcatgccaagaaatgcgaggcttctggattttgttat
gtgaatgacatcgtgctggctatcttagaactcttaaaagttcatgagcgtgttctctat
atagacattgatattcaccatggtgatggagttgaggaagcattttatactacagatagg
gtgatgactgtttcttttcataaatttggagattattttcctgggacaggtgatgtacga
gacattggatttgggaagggaaaatattactctcttaatgttcccttggatgatggaatt
gatgacgaaagctatcagtctctatttaagccaataatgggaaaggttatggagattttt
aaacctggtgctgtagtattacaatgtggtgcagactcgctgtctggagatcggttagga
tgctttaatctctccattaagggtcatgccgagtgtgtgaggtttatgagatcattcaac
gtgcctctcctgttggtgggtggtggtggttacactatacgtaatgttgctcgttgctgg
tgttatgagacaagtgtagcacttggcattgaacttgatgacaagataccacagcatgaa
tactatgaatatttcggtcctgattatactctgcatgttgctccaagtaacatggaaaat
aagaattcgcgtcatttattagaagagatcaaatcaaagcttcttgaaaacctctcaagg
cttcagcatgcaccaagtgtccaatttcaggagcggccaccagatagtgaactgccacag
atggaagaagatcatgacggagaggatgagagatatgaccccgactctgatatggaactt
gatgatgaacggaagcctctaccgggcagagtgaagagtgaattgtctgaacctgaacca
aaagacatggatgttgtcaaagaggatgaaccggatcgggaagttgacctgaaatgctct
gaaccccctgcctaa

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