Salvia splendens (scarlet sage): 121792870
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Entry
121792870 CDS
T07627
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121792870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121792870
Spliceosome [BR:
sspl03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121792870
Complex B
121792870
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
xRRM
DUF4523
Motif
Other DBs
NCBI-GeneID:
121792870
NCBI-ProteinID:
XP_042046927
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All DBs
Position
1:155718..158638
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AA seq
246 aa
AA seq
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MEEAPPAPAPAGSETASNQTIYINNLNEKIKLDELKKSLHAVFSQFGKILEVLAFKTLKH
KGQAWVVFEEVSSASNALRQMQGFPFYDKPMRIQYAKSKSDVIAKADGTFVPREKRKKHD
DRGRKKKDQHDANQAAAGLNSAYAGAYGAAPPLSQIPMGARAAPEGPAPPNNILFIQNLP
HQTTSMMLQMLFSQCPGFKEVRMVEAKPGIAFIEYENEMQSTVAMQGLQGFKISEDHPML
VTYAKK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcaccaccagcccccgcccccgctggctcggaaactgcttcgaatcagacg
atttacattaataatctcaacgagaaaattaagctcgatgaattgaagaaatcgctgcac
gcggtgttttcgcagttcgggaaaatactggaggtattggccttcaaaaccctaaagcat
aagggccaagcttgggtcgtttttgaagaggtctcttccgcctccaatgcgcttcgtcaa
atgcagggatttccgttctacgacaagccaatgcggatacaatatgccaagtcaaagtct
gatgtcatagccaaggcagatggtacttttgtacctcgagaaaaaagaaagaagcatgat
gacagaggaagaaagaagaaggatcagcatgatgcgaaccaagcagcagcgggtctaaat
tccgcatatgctggtgcttatggtgcagcccctcctttatcccagatcccaatgggtgct
agagctgctccagagggtcctgcccctccaaataacatattgttcattcaaaatcttccg
caccaaacaacttcaatgatgctgcaaatgctcttcagtcagtgccctggatttaaggaa
gttaggatggttgaagctaagcctggaattgctttcatagaatatgaaaatgagatgcag
tcaacagttgcaatgcaggggcttcagggatttaagattagtgaggaccatcctatgttg
gtcacctatgcaaagaaatag
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