Salvia splendens (scarlet sage): 121792999
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Entry
121792999 CDS
T07627
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
121792999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121792999
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121792999
Membrane trafficking [BR:
sspl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121792999
Atg1 complex
121792999
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121792999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
121792999
NCBI-ProteinID:
XP_042047106
LinkDB
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Position
2:42782839..42787642
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AA seq
605 aa
AA seq
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MDLHSYPHGEHGRFEQIFNQFLLKSLHIILDSRVPMNRLPSRGGEIRKSDRWFNLVLGDR
PAAMDSLSFWNRSLMEPMVIDIILVQESRYSLSEHDSHSTLATEMPAETVIERWVVQYEH
QRSMAPQIGDAFYKKTYKKSIILLRSVYSMLRLLPAYKAFRKQQSFKQNCGFEINYKICS
FGSPLLRSEEESMKNYSFIPIDAQQGRLSVSVMYRKDLSDFNLDSCVSHPIEIISDYVGS
PLTDPMRAFPCTSSEKGHSISFQTRGRQSAPPSPFQRPHSWSSGLQRELSSQQSQPYSAS
PPLYRSPYEYSSSPTEAYIQRNQNQRFPANQKAPCDEILSPPFSSSPSPSPPTKSVIPFH
NRRHPETAPMSIPHPMIARSPRYLSPNLSDPSRNSLPPLSPRNTKYDSSSHESPSGIRSI
RRLDSARTGEMSNTPTNAGPKLSRDSKEDSGRFSSLLSSSSSPRVGLSRTSSRLSFQDDF
GDCDCPFIVDDVDPPDNQTSSNLGARNCSEVSSLAPSTMKKSQDAAVGALVHMLKTAPPL
RQESCYHNTHSSKTEFEGEVGAASEFFKPRKASDAFEELKVYRQMKDLLLSKSAARVVSK
EKTEF
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcacagctatcctcatggtgaacatggaaggtttgagcaaatattcaatcag
tttcttctaaagagcttgcacattattttggattctagggttccgatgaaccggctgcct
agccggggaggtgaaataagaaagagcgacagatggtttaatttagttttgggggatcgc
cctgcagctatggatagcttaagtttttggaatagaagtttgatggaacctatggtgatt
gatattatacttgtgcaagagtcacgttactctttgtcagagcatgattctcactccact
ctggccacggagatgcctgctgagacagttatagagaggtgggtggttcagtatgagcat
cagaggtcaatggctcctcaaatcggtgatgccttttataagaagacatacaagaaatca
ataatcctattgcgctcggtttattcaatgctgagactccttcctgcgtataaggccttc
cgtaaacaacagtcatttaaacagaattgtggctttgagatcaattacaagatctgctcc
ttcggttctccattgttgagatcagaggaagaatcaatgaagaactattcttttattcct
attgacgcccaacaaggtcgcctatctgtatctgtgatgtaccgtaaagatctatctgac
tttaatctagattcttgtgtatcacaccctattgagatcatttcggattacgtaggtagc
cctcttactgaccctatgagggcatttccttgtacttcttctgagaagggtcattctata
tccttccagacaagagggaggcaatcagctcctccatcaccctttcaacggcctcacagc
tggtccagtggtctccaaagggagctttcatcacaacagagccaaccatatagtgcatca
ccaccattatatcgctcaccgtacgagtattcatcttctcctactgaggcatacatccaa
agaaatcaaaaccaaaggttcccggctaatcagaaagcaccctgtgatgaaatactctcc
cctccattctcatcatctccttctccatctccccctacgaagagcgtaattccttttcat
aatcggcgtcatccagaaactgctccaatgagtattcctcatccgatgatagctagaagt
cctagatatctttctcccaatttgtccgacccgagtaggaattctcttccacccttatcc
ccgagaaacaccaagtacgactcgtcatctcatgaatcaccatctggaataaggtcaata
aggagactagattcagccagaacaggagaaatgagcaacactccaactaatgctggtcct
aagttgtctcgagattcaaaagaggactctggacggttttcaagtttgctgtcttcaagt
agttctccacgtgttgggttatcgaggacctccagtcgattgtctttccaggatgacttt
ggtgattgtgactgtccatttattgttgatgacgtagatcctccagataaccaaacaagt
tcaaatctcggcgcaagaaactgttcagaagtttcttcactagcaccctcaacaatgaag
aaatcgcaagatgctgctgttggtgcccttgttcacatgctgaagacagctccgcctctc
cgccaagaatcatgctaccacaacactcattcatctaagactgagttcgagggagaagtt
ggagctgcttccgagttttttaagcctcgaaaagcgtcagatgcctttgaagaactcaag
gtttacagacaaatgaaagatttgctactttccaagagcgcagctcgtgtggtcagcaag
gaaaaaaccgagttctaa
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