Salvia splendens (scarlet sage): 121793027
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Entry
121793027 CDS
T07627
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121793027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121793027
03036 Chromosome and associated proteins [BR:
sspl03036
]
121793027
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121793027
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121793027
PBAF complex
121793027
GBAF(ncBAF) complex
121793027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
121793027
NCBI-ProteinID:
XP_042047147
LinkDB
All DBs
Position
2:43065570..43068517
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AA seq
540 aa
AA seq
DB search
MAANNNNLQKNIGGSSPFGNSMPVNPSLQQQLGSGFPGQFQFSEAQAQALAQAQSKAQVQ
AQVQAHAHAQMMAAHAHLQAQLQAAQGLAFNQAHPGGMGSLGSQSPSLSGAGSMGAKRFP
QKPPVRPPSFVTSNVASPLRPMDASAAARRKKQKLPEKQLHERVAAILPESALYTQLLEF
ESRVDAALTRKKIDIQDALKTPTYLQKTLRIYVFNTFANQIRTIPKKPNAEPPTWTLKII
GRILEEGMDADQAAMMQKANPSYPKFSTFFKRVTITLDQKIYPDNHLIIWDSARSPAPHE
GFEVKRKGDQEFTASIRLEMNYMPEKFKLSAPLTELLGIEVDTRSRIMAAIWHYVKARKL
QCPDDPSSFNCDPPLQRVFGEGKVKFTAVTQKITPHLFPPQPIHLEHRIKLSGNSPVGTA
CYDVLVDVPFPIQRELNALLANTEKTKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQSP
VEFINALVDSQNKDLKLVSGEGSRNAEKERRSEFYNQPWVEDAVIRYLNRKLPADASGHT
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaataacaacaatcttcaaaagaacattgggggttcgtctccttttgggaat
tctatgcctgtgaatccatcactgcagcagcaattggggtctggtttcccaggccagttt
cagttttccgaagctcaggctcaagcgcttgctcaggctcagtcgaaggcacaggtgcaa
gctcaggtgcaggctcatgcccatgctcaaatgatggcagctcacgcgcacctgcaagct
cagttacaagctgctcaggggcttgctttcaaccaggcacatcctggaggaatggggagt
ttgggttcacaatctccttctctttcaggagctggaagcatgggagccaaacgcttcccg
caaaaaccacctgttcgtccaccgagctttgtaacatccaacgtggcctctccattgcgg
ccaatggatgcctcagctgctgctcgtaggaaaaagcagaagctcccagagaaacagtta
cacgaaagagtcgcagctattttgccagagtcagctctttacactcagctccttgagttt
gagtctcgagtagatgctgccttgacaaggaagaaaattgatatccaagatgccctaaaa
acaccaacttaccttcagaaaaccctccgtatatatgtcttcaacacttttgctaatcag
atccgcaccattcctaagaaaccaaatgcggagccacctacatggactcttaagatcata
gggaggattttggaggagggaatggacgccgaccaggcagcaatgatgcagaaagcaaac
ccttcgtatccaaagttctccacatttttcaagagagttaccatcaccctcgaccagaaa
atataccctgataaccatttaattatatgggatagtgctcgttcacctgctcctcacgaa
ggttttgaggtcaagaggaaaggagaccaagaatttactgcaagcataagactagaaatg
aattatatgcccgagaagtttaaactttcagcacctttgacagagcttttaggtattgag
gttgatactcgttccagaattatggctgcaatatggcattatgttaaggctcgaaagttg
cagtgcccagatgacccctcttctttcaactgtgatccgccacttcaaagagtctttggg
gaaggcaaagtcaagttcacagcagtcacacaaaaaattacgccccatctgtttcctcca
cagcccatacatctggagcataggataaaactttcaggtaatagtcctgtcggaactgca
tgttatgatgtattggtcgatgtacccttcccgatacagagagaattgaatgctttgttg
gccaatactgaaaagacaaaagagatagatgcttgtgacgaagcaatttgtgctgcaata
agaaagatccatgagcaccgaaggagaagggcattcttccttggatttagtcagtcgcct
gtagagtttattaatgctcttgtagattctcaaaacaaggatctgaagcttgtgtctgga
gaaggtagtcgcaatgcagaaaaagagcgccgttcagaattctacaaccaaccatgggtt
gaagatgctgtcattcgctacctcaaccgaaagttaccagcagatgcctctggccacacc
tag
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