Salvia splendens (scarlet sage): 121793171
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Entry
121793171 CDS
T07627
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
KO
K12883
nuclear cap-binding protein subunit 2
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
sspl03015
mRNA surveillance pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121793171
09122 Translation
03013 Nucleocytoplasmic transport
121793171
03015 mRNA surveillance pathway
121793171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121793171
03041 Spliceosome [BR:
sspl03041
]
121793171
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
121793171
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
Cap binding complex
121793171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
121793171
NCBI-ProteinID:
XP_042047265
LinkDB
All DBs
Position
1:complement(971839..974937)
Genome browser
AA seq
251 aa
AA seq
DB search
MASLFKDPTKLSAYRDRRFSGTQEEYEEALLTSTTVYVGNMSFYTTEEQVYELFSRAGEI
KKMVMGLDKNSKTPCGFCFVMYYSREDAEDTVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKIVQKELEAQRQLVDYGAGSLDSFVPVMQPNYGRQG
GNYGQGGSYRGRDYPRKRHREDDRRGPDFQRRKSDFVYRRNPDNEPRPEKNPRFRESGDS
DEEDDDRKWPS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctcttcaaggatccgacgaaattgtcggcgtatagggacagacggttttct
gggactcaggaagaatatgaggaggcgctgctgacctcgaccacggtctacgtggggaat
atgtcgttttacactaccgaggagcaggtgtacgagctgttctctcgggcgggggagata
aagaagatggtcatgggtttagataagaacagcaagaccccttgcgggttctgcttcgta
atgtactattccagagaagatgctgaagatactgtgaaatatatcagcgggactatcctc
gatgaccgtcctattcgtgttgactttgattgggggttccaagaaggcagacaatggggg
cgtggacggagtggtgggcaggtgcgggatgaatatcgcacagactacgatccaggtaga
ggtggttatggtaaaatagtccagaaagagttggaagcccagaggcagctagttgattac
ggtgctggatcgctagattcatttgtacctgttatgcaaccgaactatggtaggcaaggt
ggaaactacggtcaagggggctcctaccgtggcagagattacccgcgtaagcgacataga
gaagatgaccgccgtgggccagattttcaaaggagaaagtcagacttcgtatatcgtagg
aatccagataatgaacctagacctgaaaaaaatccgcgatttcgggagagtggcgattcg
gacgaggaggatgatgatcggaagtggccgtcgtag
DBGET
integrated database retrieval system
