Salvia splendens (scarlet sage): 121793498
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Entry
121793498 CDS
T07627
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04120
Ubiquitin mediated proteolysis
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121793498
04120 Ubiquitin mediated proteolysis
121793498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121793498
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121793498
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121793498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-ANAPC11
zf-RING_5
GTP-bdg_M
zf-RING_Vps41
zf_RING_Vps8
FlxA
U-box_ZFPL1
zf_RING_Vps8_fungal
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121793498
NCBI-ProteinID:
XP_042047444
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Position
3:10552164..10555938
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AA seq
518 aa
AA seq
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MMKLQTYAGFSVVAALAIIYHAFDSRGQFYPAMVYLSTSKISLVLLLNMGLVFMCILWQL
TKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKSLHWLA
QKRVEYIETTPTVSKLSHVRIVSFMVFLLLIDCIFLYDSVDHLLETRQASVALFFSFEYI
ILAATTLSTFVKYVFHVSDMLMEGQWEKKAVCTFYLELIRDLLHLTLCMCFFLIIFLNYG
VPLHLIRELYETFRNFRIRVADYIRYRRVTSNMNDRFPDASPEELSVNDATCIICREEMT
AAKKLVCGHLFHVNCLRSWLERQNTCPTCRALVIPPEHGTSTSSTMINSLQQGTGTAGTS
TQGSSGDGVANDNVSQHQIRLQAAAAAASLYEKSFVYPSPNALMRSPGLASPSQVFQHSI
MARDGREGAASELTEQFAETTLNQFPHFNSGFGDGSSSESQLDLQRKLIEHQIEFLQNQL
QLLRTSNGEKVKDVGTSFDIKGKSVSSPSSSVIDSGET
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgcaaacttatgctgggttcagtgtggtagctgcattggctattatttac
catgcctttgacagtagaggccaattttatcctgcaatggtttacttgtcgacctcaaag
atcagtctagtgcttcttctgaatatgggattggtttttatgtgcatcctgtggcaattg
accaagaaaatcttccttggatcactccgcgaagcagaggtcgagaggctgaatgagcaa
tcatggcgggaggtcatggaaatattgtttgcaataactatttttagacaagatttttca
gttacatttcttgcaatggttactgccttgcttctgattaaatcgttgcattggttggcc
caaaagagggtggaatacatagaaacaactccaactgtttcaaagctatctcatgtgcgc
attgtatctttcatggtgttcctactccttattgattgcatctttctgtatgactcagtt
gatcatttattagaaaccagacaagcttcagttgcactgttcttttcatttgaatacata
atactggctgcaacaaccctctcaaccttcgtgaagtatgtgttccatgtcagtgacatg
cttatggaaggacaatgggaaaagaaggctgtctgcacattttacttggagcttatccga
gacttgctgcacttgactctatgcatgtgtttcttcctcatcatctttttgaactatggt
gtgcctcttcacttgatccgtgagctgtacgagacattccgaaactttagaatccgtgtg
gctgattatatacgttaccggagggtcacttcgaatatgaatgatcgtttcccagacgca
agccctgaagaactcagtgtaaatgacgcaacctgcattatatgtcgagaggagatgact
gcagccaaaaaacttgtatgtggacatcttttccatgtgaactgcctcagatcatggttg
gaaagacaaaacacatgccctacatgcagggctcttgttataccacctgagcacgggaca
tctacgagttcaacaatgataaatagcctgcagcaaggaactggtacggctggtacttct
acacaaggatctagtggtgatggtgtggcaaatgataatgtcagtcaacatcagattaga
ctccaagcagcagcagctgccgcctccttatatgaaaaatcttttgtttatccttctcca
aatgctctaatgcgatcacctggattggcctcaccttcacaagtatttcaacattcgata
atggcaagagatggtagggagggtgctgctagtgaactgactgaacagtttgccgaaaca
accttaaatcagttcccacatttcaactcgggatttggagatgggagttcatcagagtct
caacttgatttgcaaaggaagctaatcgagcaccagattgagtttctgcaaaaccagctc
cagctgctaagaacttcaaatggggagaaagtgaaggatgtggggacttcatttgatatc
aaaggaaaatcggtatcatcaccatcttcatctgtgattgactctggtgagacctaa
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