Salvia splendens (scarlet sage): 121794223
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Entry
121794223 CDS
T07627
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121794223
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121794223
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121794223
03036 Chromosome and associated proteins [BR:
sspl03036
]
121794223
Protein phosphatases and associated proteins [BR:
sspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121794223
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121794223
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121794223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
121794223
NCBI-ProteinID:
XP_042048233
LinkDB
All DBs
Position
3:complement(1520562..1527112)
Genome browser
AA seq
520 aa
AA seq
DB search
MDGGGGGGCGEVASAAAGPPAPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLAT
GDRGGRVVLFERTDSKEHGRNRRDLERMDCSVGRHPEFRYKTEFQSHEPEFDYLKSLEIE
EKINKIRWCQAANGALFLLSTNDKTIKFWKVQEKKVKKISDMNADTFKGSGNGSIASSSV
SSGPKQGVANGSYPDRSNNSLGKDLSFPPGGISSLRLPVVASYETNLVARCRRVYAHAHD
YHINSISNNSDGETFISADDLRVNLWNLEISNQSFNIVDVKPSNMEDLTEVITSAEFHPT
HCNTLAYSSSKGSIRLIDLRQSALCDSHSKQFEEHEAPGSRSFFTEIIASISDIKFAKDG
RYILSRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRV
ATGSYSNLFRVFGCAPGSTEATTLEASKNPMRRQVQTPSRPSRSLGSSITRVVRRGAESP
GVDANGSSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggacggtggtggcggtggtggttgtggagaggtggcatcagctgcggcgggtccacct
gcgccgctcgactggaaattctctcaggtcttcggcgagaggacggccggcgaagaagta
caagaagttgatatcatatcagcaattgagttcgataaaacaggtgaccatctagccact
ggtgaccgtggtggaagggttgtgttatttgaaaggactgattcgaaagagcatgggcgg
aatcgtagagacttggagaggatggactgctcagttggtcgacatcctgagttccgctac
aaaactgaattccagagccatgaacctgagttcgattatctcaaaagtttagagatcgag
gagaaaatcaacaagattcgatggtgtcaggcagctaatggtgctttgtttcttttgtct
actaatgacaaaaccatcaaattttggaaggtccaagagaagaaagtcaaaaagatttct
gatatgaatgcggacacatttaaaggttctggaaatggtagcattgcaagttccagtgtt
tcttctggtccgaagcaaggtgttgctaatggaagctaccctgaccgatctaacaattca
ttgggcaaggacttgtcatttccacctgggggcatctcctcactgcggttaccagtggtc
gcaagctatgagacaaatcttgtggcaagatgtaggagagtatatgctcatgcacatgat
taccacattaattctatctcaaataacagtgatggtgaaacatttatatcagctgatgac
ctgcgggttaatctttggaacttggaaataagcaatcagagtttcaatattgttgatgtg
aaaccctcaaatatggaagacttaacggaggtaatcacatcagcagagtttcatcctact
cattgcaacacgttagcatatagtagttctaaaggatcaattcgtctgattgatctgcgg
cagtctgccttgtgtgactcacattctaagcaatttgaggaacatgaggcacctggatca
agatcctttttcactgagataattgcttcaatatcagatattaaatttgcaaaggatggt
agatacatactcagtcgtgattacatgacccttaagttatgggatattaatatggattct
ggtccagtgtcgactttccaggttcatgaatatttgagaccaaagttatgtgacctgtat
gaaaatgattccatttttgataaattcgagtgctgcttgagtggtgacggccttcgagtg
gcgactggttcttacagcaatcttttccgtgtatttggttgtgctcctgggagtacggag
gctacaacactggaagccagcaaaaacccgatgagaaggcaggtccagaccccatccagg
ccttcccgatcgctgggcagtagcatcacccgtgttgtccgaagaggtgcagagagtccg
ggagttgatgcaaacgggagctcctttgatttcaccacaaagctactccacttggcatgg
catccctccgaaaactcaatcgcctgtgctgctgcaaatagcctgtacatgtactatgca
taa
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