Salvia splendens (scarlet sage): 121794378
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Entry
121794378 CDS
T07627
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121794378
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sspl04812
]
121794378
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121794378
Cytoskeleton proteins [BR:
sspl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
121794378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
Adaptin_N
Cnd1
UTP20
Tti2
MMS19_C
INTS1_R4
MMS19_N
HEAT_Maestro
RRP12_HEAT
Npa1
Arm
Dopey_N
SEN1_N
Motif
Other DBs
NCBI-GeneID:
121794378
NCBI-ProteinID:
XP_042048444
LinkDB
All DBs
Position
3:complement(3038296..3051220)
Genome browser
AA seq
1433 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHQLLEASRKTLSPSEVTSLVDVGLDLLKDNNFRVSQG
GLQALASAAVLSGEHFKLHFNALVPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWMHRSWRIREEFARTVTSAIGLFASTELPLQRAILPPILQMLNDPNPGVREAAI
SCIEEMYTQAGPQFLEELNRHHLPAAMLRDINARVEKIEPKIHSSDAIVSNYSSTETKPT
MHNPKKSSPKAKTTSRENSLFGADGDITEKPVEPIKVYSEKELTREFEKIASTLVPEKDW
SVRIAAMQRVEGLVIGGAADYPGFRGLLKQLIGPLSTQLSDRRSSIVKQGCHLLNFLSKD
LLGDFEGCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVPRVLPRIVDSAKNDRN
AILRARCCDYALLILEYWADAPEIQRSADLYEDLIRCCVADAMSEVRSTARTCYRMFAKT
WPDRSRRLFMSFDPVVQRVINDEDGGMHRRHASPSIRERSSNMSFSTHASTPSNIPGYGT
SAIVAMDRSGSLSSGTSLTSGLLISQAKSMGKGAERSLESVLHSSKQKVTAIESMLRGLD
ISERGRSSSLDLGVDPPSSRDPPFPLAVPASNSLTNSLTDPVSGISKGNNRNGGLVLSDI
ITQIQASKESSKLSYYNSTGSELLSVHSSYSAKRAPEKVQDRGFAEENPDFRDSRRYMNV
QDKQYLETQYRDASYRESHGNHVPNFQRPLLRKNTTGRVSAGRRRSFDDSQLPLGDLSSY
SDSPATLTDALNEGLSSSSDWNARVAAFSYIHSLLQQGPRGIQDVMQSFEKVMKLFFQHL
DDPHHKVAQAALSTLADLIPACRKPFESYMERILPHVFSRLIDPKELVRQPCSTTLDIVG
KTYGTDSLLPALLRSLDEQRSPKAKLAVIEFAIGSFNKHASNSEGSANSGILKLWLAKLT
PLVHDKNTKLKEAAITCIISVYTHFDSVAVLNFILSLSVEEQNSLRRALKQYTPRIEVEL
MNFLQSKKERRIKSSYDPSDVVGTSSEDGYNGSLKKSQLFGRYSSGSIDSDSGRKWSSLQ
DASFITGSIGNQKSDDTQDNLHHQLVETNLNADVTTSNHKSLKYIPNISGDNVGLSAIDS
HPNAEVSLTSRLDINGLIGSEHLQKSLDIGVDNEPSPEPSLSFRELPALKLNSSTETGPS
IPQILHMICNGSDDSPSANKRQALQQLIEISISNDHSVWSKYFNQILTAVLEMLDDSDSL
ARELVLSLIVEMLKNQKESMEYSVEIVIEKLLNVTKDNVLKVSNESERCLTIVLSQYDPF
RCLSVIVPLLVTEDERTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFDAFGNQSADVR
KTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGTPIDATQ
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcgctggagttggcgcgtgcgaaagacactaaggagcggatggcgggcgtc
gagcgcctccaccaactccttgaagcctcgagaaagacgctatctccgtcggaggtgacg
tcactcgtcgacgtcggcctagatctcttgaaggataacaacttccgtgtctcacagggc
ggtttgcaggcgctcgcctccgccgccgtgctctctggcgagcacttcaagctgcatttc
aatgcgcttgttccggcggtggtagagaggctcggtgacgccaaacagcctgttagggat
gccgccaggaggctgctgctcactctcatggaggtttcttcaccaacaattatcgttgaa
agggcaggatcttatgcttggatgcacagaagttggagaattcgagaagagtttgctcgc
acagtcacgtcagctattggtctctttgcatctacagaactacctcttcagcgtgccatt
cttcctcctattttgcagatgctgaatgatccaaaccctggtgttagggaggcagctatt
tcatgcattgaggagatgtatactcaggctgggcctcagttccttgaagaattgaatcga
catcatctacctgcagcaatgttaagagatattaatgccagagtagaaaagattgagccc
aagattcactcttcagatgctattgtgagcaattactcatctactgagaccaagcctacg
atgcataatccaaagaaaagtagcccaaaggccaaaaccacgtcacgcgaaaattctctc
tttggagcagatggtgacatcacagaaaagccagtagaacctattaaagtatattctgaa
aaagagcttacaagagagtttgagaagattgcttctaccttagtgcctgaaaaagattgg
tctgtacgtattgctgccatgcagagagttgaaggccttgttattggaggtgcagctgat
taccctggtttccgggggcttctcaagcagctaattggtcctttgagcacacaattatca
gatcggcgttctagcattgtcaagcagggatgtcatttgttaaacttcttatctaaagat
ctcttgggggattttgagggatgcgctgagatgtttattccggtccttttcaagcttgtt
gtcataacagtgcttgtaattgcagagtcggcggataactgcataaagacgatgttacgc
aattgcaaagttcctcgtgtacttccccggattgttgactctgcaaagaatgaccgcaat
gctatactccgtgcgaggtgttgtgattatgcgcttcttatacttgaatattgggctgat
gcacctgaaatacaacggtcggctgacctctatgaagatcttattagatgttgtgtggct
gatgcaatgagtgaggtacgatctactgcaaggacctgttacagaatgtttgctaaaaca
tggcctgatcgctcccggcgtctgttcatgtcttttgatcctgttgttcaaagggtaata
aacgatgaagatggaggaatgcatagaagacatgcttcaccttccattcgtgaaagaagt
tctaacatgtcattctccactcatgcatccacaccttcaaatatacctggttatgggact
tctgcgatagtggcaatggatagaagcggtagtttatcctcagggacatctcttacttct
ggactactgatctctcaagcaaaatctatgggcaagggtgcagagcgtagcctagaaagt
gtgttgcactcgagcaagcagaaggtcactgccatagagagtatgctgagaggcttggat
atatcagagagaggacgatcctccagtttggacttaggagttgaccctccatcttctcgt
gatccaccattcccccttgcggttccagcatcaaatagtcttacaaattctttaacagat
ccggtatctggtatatctaaaggcaacaatcgcaatggagggttggtgctttctgatatc
attacacaaatccaagcctctaaggagtcgagtaaactatcatattataacagcactgga
agtgagcttttgtctgtgcattcttcttactcagccaagagagctccagaaaaggtacaa
gatagaggatttgctgaagaaaatcctgattttagggattcaaggagatacatgaacgtt
caagataaacagtacttagagacacaatacagagatgctagttatagggagtcacatggt
aaccatgtaccgaatttccagcgtccacttctaaggaagaacactactgggcgagtgtct
gctggcaggaggaggagctttgatgacagtcagctcccactgggtgatctctcaagttat
tcggacagcccagctactcttactgatgctctaaatgaagggctcagttctagttcagat
tggaatgcacgggtggctgcatttagttatattcattctcttctgcagcaaggtccaaga
ggtattcaagacgtaatgcagagttttgagaaggtcatgaagctgttttttcaacacctg
gatgacccgcatcacaaagttgcacaggcagccctttcaactcttgcagatcttattcca
gcttgcagaaagccatttgaaagttacatggagaggattctaccccatgttttttctagg
ttgattgatccaaaggaattagtgaggcaaccttgctcaactacactggatattgttggc
aaaacatatggtaccgattcacttctacctgctctgttgcgttcgttggacgaacaacga
tctcccaaggcaaaattagctgttattgagtttgctattggttcatttaacaagcatgct
tcaaattctgaaggttctgccaatagtggcatccttaagctatggcttgcaaaattaacc
ccactggttcatgacaaaaatacaaaattgaaggaagcagctataacatgcataatatct
gtttatactcactttgactcggtggcggtattgaacttcattcttagcttatcggttgaa
gaacagaactccttaagaagagccctcaagcagtatactcctcgcatagaggtagaactc
atgaactttctgcaaagcaagaaagagagacgcatcaaatcctcatatgatccatctgac
gtggttggaacatcttctgaagatggctataatggatcattaaagaagagtcagttgttt
ggtagatattcttctggatctattgacagtgatagtgggaggaagtggagctctcttcaa
gatgcatccttcatcacaggttctattgggaaccaaaaatctgatgatacacaggacaat
ttgcatcatcaattggtagagactaacttgaatgctgatgttacaacttcaaaccacaaa
agtttgaaatacatacctaatatctccggtgataatgtgggattatcagcaatagatagt
catccaaacgcggaggtttctttgacatcacgtttggacatcaatggactgattggatct
gaacatctgcagaagtctctagacattggggttgacaatgagccttcacctgaaccgtca
ctaagttttcgtgaacttcctgctcttaaattaaattcttctaccgaaacaggaccaagt
atccctcagattcttcatatgatatgcaatgggagtgacgacagtccttcagcaaataaa
cggcaagcacttcaacagttgattgaaatctccatatctaatgaccactccgtctggagc
aagtacttcaatcagatattaactgctgtacttgaaatgctggatgattccgactcatta
gcccgcgagctagttctctcgctcattgttgagatgttaaagaatcagaaggagtcaatg
gagtattctgttgagattgtaattgaaaagctgcttaatgtgacgaaggacaacgttttg
aaggtctccaatgaatccgaacgttgcttgacaattgtgttgtctcagtatgatccattc
cggtgtctaagtgttattgtgcctctgcttgtgaccgaagatgagagaactcttgtgaca
tgcataaactgtttgactaagcttgtaggcaggctctctcaagaggagctgatggctcag
ttgccctcgtttttgcctgctctttttgatgcatttgggaatcagagtgcagatgtccgg
aagactgttgttttctgtctggtggacatatatatcatgctggggaaagcattcttgcca
tatttggaagggcttaatagtacacaactccggctggtgacgatatatgcaaacaggata
tctcaggcgaggaccggtactccaattgatgctacccaatga
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